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PEC Original Annotations
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Essentiality
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|
Class
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non-essential
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|
References (PMID)
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|
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Related gene (MG1655 PEC)
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|
Gene Search
|
Search MG1655 PEC by gene name:
yiaU
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yiaU
Search strains by all related name:
yiaU b3585 ECK3574 JW3557
|
General information (Go to Linear View: )
|
|
Gene Name
|
yiaU
|
|
Alternative name
|
b3585,ECK3574,JW3557
|
|
Location, Length
|
3,887,449 - 3,888,423
(
-
)
;
83.67
min
;
975
(bp) ,
324
(aa)
|
|
Product
|
predicted DNA-binding transcriptional regulator
|
|
Note
|
ECK3574:JW3557:b3585
|
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Function
|
|
|
PID
|
85676458
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YIAU_ECOLI
(
P37682
;
Q2M7P8
)
|
|
- Protein name
|
RecName: Full=Uncharacterized HTH-type transcriptional regulator yiaU;
|
|
- Synonyms
|
|
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- Gene name
|
Name=yiaU; OrderedLocusNames=b3585, JW3557;
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Homology Analysis
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BLAST
|
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Bacteria
|
|
GTOP
|
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PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MTKLQLKYRE LKIISVIAAS ENISHAATVL GIAQANVSKY LADFESKVGL KVFDRTTRQL MLTPFGTALL
0071 PYINDMLDRN EQLNNFIADY KHEKRGRVTI YAPTGIITYL SKHVIDKIKD IGDITLSLKT CNLERNAFYE
0141 GVEFPDDCDV LISYAPPKDE SLVASFITQY AVTAYASQRY LEKHPISRPD ELEHHSCILI DSMMIDDANI
0211 WRFNVAGSKE VRDYRVKGNY VCDNTQSALE LARNHLGIVF APDKSVQSDL QDGTLVPCFQ QPYEWWLDLV
0281 AIFRKREYQP WRVQYVLDEM LREIRHQLAQ SQQLRPEQAA ESED
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 agataaaaaa gagtcggcat aataatgctt
-070 acaatttctc cggtgcaaga ttcatattta tatagtaata tataaaatta tatataattg ggctgttgcg
0001 atgacaaaat tacaacttaa gtaccgggag ttaaaaatta tctcggtaat cgctgccagt gaaaatatca
0071 gccatgccgc gactgtactt ggcatcgcac aggccaacgt cagcaaatat cttgctgatt ttgaatcaaa
0141 agtgggttta aaagtctttg accgaaccac ccggcagctg atgctcacac cttttggcac cgcgctgtta
0211 ccgtacatca acgacatgct ggacagaaac gagcaactta ataattttat tgcagattat aagcatgaga
0281 aacgtggtcg ggtcaccatc tacgccccaa ccggcataat tacctattta tccaaacatg taatcgataa
0351 aattaaagat atcggtgata tcaccttatc gctaaaaacc tgcaatcttg agcgtaatgc cttttatgaa
0421 ggcgtcgaat ttcctgatga ttgtgatgtt ttaatcagct acgctccacc aaaagatgaa tcgctggttg
0491 ccagttttat tacccaatat gccgtaaccg cttatgccag ccagcgctat cttgagaaac atcccattag
0561 ccgtcctgac gaactcgaac atcactcctg tattttgatc gactcgatga tgatcgacga cgcgaatatc
0631 tggcgcttca acgtcgccgg gagtaaagag gtgcgggatt atcgcgtgaa gggaaattac gtttgcgaca
0701 acacgcaatc tgcgctggag ctggcacgaa atcacctggg gattgtgttt gcgccagaca aaagtgtgca
0771 gagcgacctg caagacggca cgctggtgcc ctgctttcag caaccctatg aatggtggct ggatctggtg
0841 gctatcttcc gtaaacggga ataccagccc tggcgggtcc agtatgtgct ggatgaaatg ctgcgtgaaa
0911 ttcgccacca gcttgctcag tcgcagcaac tgcggcctga acaagcggcg gaaagcgaag attaatgatc
0981 gagataaagg taatgcaccc agctggtcat gcgtaatagc actttgcgca tcaccgagac atggctgaaa
1051 tgatcagagt aaaccgccac ctggg
|
