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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
rep
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Related strains
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Strains Search
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Search strains by gene name:
rep
Search strains by all related name:
rep b3778 dasC ECK3770 JW5604 mbrA mmrA?
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General information (Go to Linear View: )
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Gene Name
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rep
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Alternative name
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b3778,dasC,ECK3770,JW5604,mbrA,mmrA?
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Location, Length
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3,673,983 - 3,676,004
(
-
)
;
79.07
min
;
2022
(bp) ,
673
(aa)
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Product
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DNA helicase and single-stranded DNA-dependent ATPase
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Note
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ECK3770:JW5604:b3778
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Function
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PID
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85676270
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
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REP_ECOLI
(
P09980
;
Q2M886; Q6BF05
)
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- Protein name
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RecName: Full=ATP-dependent DNA helicase rep; EC=3.6.1.-;
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- Synonyms
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- Gene name
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Name=rep; OrderedLocusNames=b3778, JW5604;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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PSI-BLAST
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nr
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BLAST
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DNA helicase and single-stranded DNA-dependent ATPase [Escherichia coli str. K-12 substr. MG1655]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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MMBR References
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Science. 1992;257(5071):771-8.
Analysis of the Escherichia coli genome: DNA sequence of the region from 84.5 to 86.5 minutes.
Daniels DL, Plunkett G 3rd, Burland VD, Blattner FR.
(
1379743
)
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| Sequences |
Amino acid
FASTA format
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0001 MRLNPGQQQA VEFVTGPCLV LAGAGSGKTR VITNKIAHLI RGCGYQARHI AAVTFTNKAA REMKERVGQT
0071 LGRKEARGLM ISTFHTLGLD IIKREYAALG MKANFSLFDD TDQLALLKEL TEGLIEDDKV LLQQLISTIS
0141 NWKNDLKTPS QAAASAIGER DRIFAHCYGL YDAHLKACNV LDFDDLILLP TLLLQRNEEV RKRWQNKIRY
0211 LLVDEYQDTN TSQYELVKLL VGSRARFTVV GDDDQSIYSW RGARPQNLVL LSQDFPALKV IKLEQNYRSS
0281 GRILKAANIL IANNPHVFEK RLFSELGYGA ELKVLSANNE EHEAERVTGE LIAHHFVNKT QYKDYAILYR
0351 GNHQSRVFEK FLMQNRIPYK ISGGTSFFSR PEIKDLLAYL RVLTNPDDDS AFLRIVNTPK REIGPATLKK
0421 LGEWAMTRNK SMFTASFDMG LSQTLSGRGY EALTRFTHWL AEIQRLAERE PIAAVRDLIH GMDYESWLYE
0491 TSPSPKAAEM RMKNVNQLFS WMTEMLEGSE LDEPMTLTQV VTRFTLRDMM ERGESEEELD QVQLMTLHAS
0561 KGLEFPYVYM VGMEEGFLPH QSSIDEDNID EERRLAYVGI TRAQKELTFT LCKERRQYGE LVRPEPSRFL
0631 LELPQDDLIW EQERKVVSAE ERMQKGQSHL ANLKAMMAAK RGK
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Nucleotide
FASTA format
View sequence out neighbor 100bp
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-100 taaacatccg cagccaaccg gttagcggct
-070 tacacgcggt cacattcaaa tgcgattctg ctacaatcct ccccccgttc gaagattgag caatacacct
0001 atgcgtctaa accccggcca acaacaagct gtcgaattcg ttaccggccc ctgcctggtg ctggcgggcg
0071 cgggttccgg taaaactcgt gttatcacca ataaaatcgc ccatctgatc cgcggttgcg gttatcaggc
0141 gcggcacatt gcggcggtga cctttactaa taaagcagcg cgcgagatga aagagcgtgt agggcagacg
0211 ctggggcgca aagaggcgcg tgggctgatg atctccactt tccatacgtt ggggctggat atcatcaaac
0281 gcgagtatgc ggcgcttggg atgaaagcga acttctcgtt gtttgacgat accgatcagc ttgctttgct
0351 taaagagttg accgaggggc tgattgaaga tgacaaagtt ctcctgcaac aactgatttc gaccatctct
0421 aactggaaga atgatctcaa aacaccgtcc caggcggcag caagtgcgat tggcgagcgg gaccgtattt
0491 ttgcccattg ttatgggctg tatgatgcac acctgaaagc ctgtaacgtt ctcgacttcg atgatctgat
0561 tttattgccg acgttgctgc tgcaacgcaa tgaagaagtc cgcaagcgct ggcagaacaa aattcgctat
0631 ctgctggtgg atgagtatca ggacaccaac accagccagt atgagctggt gaaactgctg gtgggcagcc
0701 gcgcgcgctt taccgtggtg ggtgacgatg accagtcgat ctactcctgg cgcggtgcac gtccgcaaaa
0771 cctggtgctg ctgagtcagg attttccggc gctgaaggtg attaagcttg agcagaacta tcgctcttcc
0841 gggcgtattc tgaaagcggc gaacatcctg atcgccaata acccgcacgt ctttgaaaag cgtctgttct
0911 ccgaactggg ttatggcgcg gagctaaaag tattaagcgc gaataacgaa gaacatgagg ctgagcgcgt
0981 tactggcgag ctgatcgccc atcacttcgt caataaaacg cagtacaaag attacgccat tctttatcgc
1051 ggtaaccatc agtcgcgggt gtttgaaaaa ttcctgatgc aaaaccgcat cccgtacaaa atatctggtg
1121 gtacgtcgtt tttctctcgt cctgaaatca aggacttgct ggcttatctg cgcgtgctga ctaacccgga
1191 cgatgacagc gcatttctgc gtatcgttaa cacgccgaag cgagagattg gcccggctac gctgaaaaag
1261 ctgggtgagt gggcgatgac gcgcaataaa agcatgttta ccgccagctt tgatatgggc ctgagtcaga
1331 cgcttagcgg acgtggttat gaagcattga cccgcttcac tcactggttg gcagaaatcc agcgtctggc
1401 ggagcgggag ccgattgccg cggtgcgtga tctgatccat ggcatggatt atgaatcctg gctgtacgaa
1471 acatcgccca gcccgaaagc cgccgaaatg cgcatgaaga acgtcaacca actgtttagc tggatgacgg
1541 agatgctgga aggcagtgaa ctggatgagc cgatgacgct cacccaggtg gtgacgcgct ttactttgcg
1611 cgacatgatg gagcgtggtg agagtgaaga agagctggat caggtgcaac tgatgactct ccacgcgtcg
1681 aaagggctgg agtttcctta tgtctacatg gtcggtatgg aagaagggtt tttgccgcac cagagcagca
1751 tcgatgaaga taatatcgat gaggagcggc ggctggccta tgtcggcatt acccgcgccc agaaggaatt
1821 gacctttacg ctgtgtaaag aacgccgtca gtacggcgaa ctggtgcgcc cggagccgag ccgctttttg
1891 ctggagctgc cgcaggatga tctgatttgg gaacaggagc gcaaagtggt cagcgccgaa gaacggatgc
1961 agaaagggca aagccatctg gcgaatctga aagcgatgat ggcggcaaaa cgagggaaat aatcaaggcc
2031 ggaaaagatg cgtcagcatc gcatccggca cttactcatt aatgcacttc cagcggccag tggacatagc
2101 tctgccactg gctttcctga gc
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