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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
uvrD
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Related strains
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Strains Search
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Search strains by gene name:
uvrD
Search strains by all related name:
uvrD b3813 dar-2 dda ECK3808 JW3786 mutU pdeB rad recL srjC uvr502 uvrE
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General information (Go to Linear View: )
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Gene Name
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uvrD
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Alternative name
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b3813,dar-2,dda,ECK3808,JW3786,mutU,pdeB,rad,recL,srjC,uvr502,uvrE
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Location, Length
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3,636,536 - 3,638,698
(
-
)
;
78.27
min
;
2163
(bp) ,
720
(aa)
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Product
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DNA-dependent ATPase I and helicase II
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Note
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ECK3808:JW3786:b3813
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Function
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PID
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85676237
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
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UVRD_ECOLI
(
P03018
;
P76758; Q2M8B9; Q47709
)
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- Protein name
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RecName: Full=DNA helicase II; EC=3.6.1.-;
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- Synonyms
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- Gene name
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OrderedLocusNames=b3813, JW3786;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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RecName: Full=DNA helicase II
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PSI-BLAST
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nr
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BLAST
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DNA-dependent ATPase I and helicase II [Escherichia coli str. K-12 substr. MG1655]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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MMBR References
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Science. 1992;257(5071):771-8.
Analysis of the Escherichia coli genome: DNA sequence of the region from 84.5 to 86.5 minutes.
Daniels DL, Plunkett G 3rd, Burland VD, Blattner FR.
(
1379743
)
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| Sequences |
Amino acid
FASTA format
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0001 MDVSYLLDSL NDKQREAVAA PRSNLLVLAG AGSGKTRVLV HRIAWLMSVE NCSPYSIMAV TFTNKAAAEM
0071 RHRIGQLMGT SQGGMWVGTF HGLAHRLLRA HHMDANLPQD FQILDSEDQL RLLKRLIKAM NLDEKQWPPR
0141 QAMWYINSQK DEGLRPHHIQ SYGNPVEQTW QKVYQAYQEA CDRAGLVDFA ELLLRAHELW LNKPHILQHY
0211 RERFTNILVD EFQDTNNIQY AWIRLLAGDT GKVMIVGDDD QSIYGWRGAQ VENIQRFLND FPGAETIRLE
0281 QNYRSTSNIL SAANALIENN NGRLGKKLWT DGADGEPISL YCAFNELDEA RFVVNRIKTW QDNGGALAEC
0351 AILYRSNAQS RVLEEALLQA SMPYRIYGGM RFFERQEIKD ALSYLRLIAN RNDDAAFERV VNTPTRGIGD
0421 RTLDVVRQTS RDRQLTLWQA CRELLQEKAL AGRAASALQR FMELIDALAQ ETADMPLHVQ TDRVIKDSGL
0491 RTMYEQEKGE KGQTRIENLE ELVTATRQFS YNEEDEDLMP LQAFLSHAAL EAGEGQADTW QDAVQLMTLH
0561 SAKGLEFPQV FIVGMEEGMF PSQMSLDEGG RLEEERRLAY VGVTRAMQKL TLTYAETRRL YGKEVYHRPS
0631 RFIGELPEEC VEEVRLRATV SRPVSHQRMG TPMVENDSGY KLGQRVRHAK FGEGTIVNME GSGEHSRLQV
0701 AFQGQGIKWL VAAYARLESV
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Nucleotide
FASTA format
View sequence out neighbor 100bp
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-100 tgacctcgct gatataatca gcaaatctgt
-070 atatataccc agctttttgg cggagggcgt tgcgcttctc cgcccaacct atttttacgc ggcggtgcca
0001 atggacgttt cttacctgct cgacagcctt aatgacaaac agcgcgaagc ggtggccgcg ccacgcagca
0071 accttctggt gctggcgggc gcgggcagtg gtaagacgcg cgtactggtg catcgtatcg cctggttgat
0141 gagcgtggaa aactgctcgc catactcgat tatggcggtg acgtttacca acaaagcggc ggcggagatg
0211 cgtcatcgta tcgggcaact gatgggcacg agccagggcg gtatgtgggt cggcaccttc cacgggctgg
0281 cgcaccgttt gctgcgtgcg caccatatgg acgccaatct gccgcaggat ttccagatcc tcgacagtga
0351 agaccagcta cgcctgctta agcgtctgat caaagccatg aacctcgacg agaagcagtg gccgccgcgg
0421 caggcaatgt ggtacatcaa cagccagaaa gatgaaggcc tgcgtccgca tcatattcaa agctacggta
0491 atccggtgga gcagacctgg cagaaggtgt atcaggcgta tcaggaagcg tgtgaccgcg cgggcctggt
0561 ggacttcgcc gagctgctgc tgcgcgctca cgagttgtgg cttaacaagc cgcatatcct gcaacactac
0631 cgcgaacgtt ttaccaatat cctggtggac gaattccagg ataccaacaa cattcagtac gcgtggatcc
0701 gcctgctggc gggcgacacc ggcaaagtga tgatcgtcgg tgatgacgac cagtcaatct acggctggcg
0771 cggggcgcag gtggagaata ttcagcgttt ccttaatgat ttccccggtg ccgaaactat tcgtctggag
0841 caaaactacc gctctaccag caatattctg agcgccgcta acgccctgat tgaaaacaat aacgggcgtc
0911 tgggtaaaaa actgtggacc gatggcgcgg acggtgagcc tatttccctc tattgcgctt ttaacgaact
0981 cgatgaagcg cgttttgtgg ttaaccgcat caaaacctgg caggacaacg gcggagcgct tgccgagtgc
1051 gccattctct accgcagcaa cgcccagtcg cgggtgctcg aagaggcgtt attgcaggcc agtatgccgt
1121 accgtattta cggcgggatg cgcttcttcg aacgccagga aatcaaagat gcgctctcgt atctgcgcct
1191 gattgccaac cgcaacgacg acgcggcctt tgagcgtgtg gtgaatacgc caacgcgggg tattggtgac
1261 cggacgctgg acgtggtacg tcagacatcg cgcgatcgcc agttaacact ctggcaggca tgtcgtgagc
1331 tgttgcagga aaaagccctc gccgggcgag ctgccagcgc cttgcagcga tttatggaat taatcgacgc
1401 cttagcgcag gaaactgccg atatgccgct gcatgtacag actgaccggg taattaaaga ctccggcctg
1471 cgtaccatgt atgagcagga gaagggcgaa aaaggtcaga cgcgtatcga aaacttagag gaactggtga
1541 cggcaacgcg ccagttcagc tacaacgaag aagacgaaga tttaatgccg ctgcaggcgt tcctctccca
1611 tgcggcactg gaagcaggtg aagggcaggc ggatacctgg caggatgcgg tgcagttgat gacgctacac
1681 tcggcgaaag gcctggagtt cccgcaggtg tttatcgttg gtatggaaga gggcatgttc ccaagccaga
1751 tgtcgctgga tgaaggcggg cgtctggaag aagaacgccg tctggcctac gttggcgtaa cccgcgcgat
1821 gcagaaactg acgctgacct acgcggaaac ccgccgtctg tatggtaaag aggtttacca tcgcccgtcg
1891 cgctttatcg gcgagctgcc ggaagagtgt gtggaagagg tgcgcctgcg cgccacggta agccgcccgg
1961 tcagccatca gcggatgggt acgccgatgg tcgagaacga cagcggctac aagctcggcc agcgcgtacg
2031 ccacgctaag tttggtgaag gcaccattgt caatatggaa ggcagcggtg agcatagccg tttgcaggtg
2101 gcatttcagg gccagggtat taaatggctg gtggcggcat acgcccggct ggagtcggtg taacgttgcc
2171 ggatgcggtg ctgcgcacct tatttggcct aaaaaatcat tcagattcaa taaattgcaa cgtcatgtag
2241 gccggatagg gcgtttacgc cgc
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