|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
frvR
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
frvR
Search strains by all related name:
frvR b3897 ECK3890 JW3868 yiiH
|
General information (Go to Linear View: )
|
|
Gene Name
|
frvR
|
|
Alternative name
|
b3897,ECK3890,JW3868,yiiH
|
|
Location, Length
|
3,546,826 - 3,548,574
(
+
)
;
76.34
min
;
1749
(bp) ,
582
(aa)
|
|
Product
|
predicted regulator
|
|
Note
|
ECK3890:JW3868:b3897
|
|
Function
|
|
|
PID
|
85676162
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
FRVR_ECOLI
(
P32152
;
Q2M8J4
)
|
|
- Protein name
|
RecName: Full=Putative frv operon regulatory protein; Includes: RecName: Full=Putative phosphotransferase EIIA component; EC=2.7.1.-; AltName: Full=Putative PTS system EIIA component;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=frvR; Synonyms=yiiH; OrderedLocusNames=b3897, JW3868;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
predicted regulator [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MLNERQLKIV DLLEQQPRTP GELAQQTGVS GRTILRDIDY LNFTLNGKAR IFASGSAGYQ LEIFERRSFF
0071 QLLQKHDNDD RLLALLLLNT FTPRAQLASA LNLPETWVAE RLPRLKQRYE RTCCLASRPG LGHFIDETEE
0141 KRVILLANLL RKDPFLIPLA GITRDNLQHL STACDNQHRW PLMQGDYLSS LILAIYALRN QLTDEWPQYP
0211 GDEIKQIVEH SGLFLGDNAV RTLTGLIEKQ HQQAQVISAD NVQGLLQRVP GIASLNIIDA QLVENITGHL
0281 LRCLAAPVWI AEHRQSSMNN LKAAWPAAFD MSLHFITLLR EQLDIPLFDS DLIGLYFACA LERHQNERQP
0351 IILLSDQNAI ATINQLAIER DVLNCRVIIA RSLSELVAIR EEIEPLLIIN NSHYLLDDAV NNYITVKNII
0421 TAAGIEQIKH FLATAFIRQQ PERFFSAPGS FHYSNVRGES WQHITRQICA QLVAQHHITA DEAQRIIARE
0491 GEGENLIVNR LAIPHCWSEQ ERRFRGFFIT LAQPVEVNNE VINHVLIACA AADARHELKI FSYLASILCQ
0561 HPAEIIAGLT GYEAFMELLH KG
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AAGCCGATTA CGAAGCTCTG CTCACGCTGA
-070 TACGGGGTTT TCTGACGACC TTAACTGCGG AGAAAGTCAA CGCGTTTAGC CAGTTCCGTC AGGTGGATTA
0001 atgctaaacg aacgccagtt aaagattgtc gatctgctgg agcaacagcc gcgcacgcct ggcgagctgg
0071 cgcaacagac tggcgtttca ggcaggacca tcctgcgtga tattgactat ctcaacttca cccttaacgg
0141 caaagcccgc attttcgcca gtggcagtgc gggctatcag ctggaaatct tcgagcgccg cagctttttt
0211 cagttgctgc aaaagcacga taacgacgat cggctgctgg cgctgttatt actgaatact ttcactcccc
0281 gtgcgcaact cgcctcggcg cttaatttgc cagaaacgtg ggtagcagag cgtctgcccc ggttaaaaca
0351 gcgttatgaa cgcacttgtt gcctggccag ccgccctggt ttgggccatt tcattgatga gacagaagag
0421 aaacgcgtta tcttgctggc gaacttgctg cgcaaagatc cgtttttaat tccgctggcg ggcataacac
0491 gagacaacct tcagcattta tccacggcct gcgacaacca acaccgctgg ccgctcatgc agggtgatta
0561 tctctccagc ctgattctgg cgatttacgc cctgcgtaat caactgaccg atgagtggcc gcaatatccc
0631 ggtgacgaga taaaacaaat cgttgaacat agcggtctgt ttcttggtga taacgctgta agaaccctga
0701 cgggtttgat agagaaacag catcagcaag cgcaggtaat ttcagccgat aatgtgcagg ggttgctgca
0771 aagggtgccg ggcatcgcgt cattgaatat tattgatgcg cagctggttg agaatattac cgggcattta
0841 ttacgttgcc ttgccgcacc agtgtggatt gctgagcacc gccagagcag catgaataac ctgaaagccg
0911 cctggcctgc ggcctttgat atgagtctgc actttattac gctactgcgt gaacagctcg atattcccct
0981 tttcgacagc gatctgatcg gtttgtattt tgcctgtgcg ctggagcggc atcaaaacga acgccagccg
1051 atcattttgc tctcggacca gaacgcgatt gccactatta atcagctcgc cattgagcgc gatgttttaa
1121 attgtcgggt aattattgcc cgtagcttaa gcgaacttgt tgccattcgc gaagagattg agccgttatt
1191 gatcattaac aacagccatt atttactgga tgacgcggta aataattaca tcaccgtaaa aaatatcatt
1261 acggctgccg gtatcgaaca aataaaacat tttctggcga cggcatttat tcgccaacag ccggagcgtt
1331 ttttctctgc ccccggaagt tttcattatt cgaatgtacg cggtgaaagc tggcaacata ttacccggca
1401 aatttgtgcg caattagtcg cacaacacca tattaccgcc gatgaagcac aacgcatcat cgcccgcgaa
1471 ggcgaaggtg aaaacctgat tgttaatcgc ctcgccatcc cacattgctg gagcgaacag gagcgacgtt
1541 ttcgtggatt ttttattacc ctcgcccaac cagttgaggt gaataacgaa gtcattaacc atgtcttgat
1611 cgcctgcgcc gccgccgatg cgcgtcatga gctaaaaata tttagctatc tggcaagcat attgtgtcag
1681 catccggcgg agattattgc cgggttaaca ggatatgagg catttatgga gttacttcac aaggggtgaA
1751 CTGTGTCGGA TGCGCCGCAT CCGACACTGC ATTTATCATC AAAAACGTTT AACGCAGGCT ATTATAGTCA
1821 TCAACCATTT CGTTGTACTC GCGTAATGC
|
