|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
tdcA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
tdcA
Search strains by all related name:
tdcA b3118 ECK3107 JW3089
|
General information (Go to Linear View: )
|
|
Gene Name
|
tdcA
|
|
Alternative name
|
b3118,ECK3107,JW3089
|
|
Location, Length
|
3,265,982 - 3,266,920
(
-
)
;
70.29
min
;
939
(bp) ,
312
(aa)
|
|
Product
|
DNA-binding transcriptional activator
|
|
Note
|
ECK3107:JW3089:b3118
|
|
Function
|
|
|
PID
|
85675917
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
TDCA_ECOLI
(
P0ACQ7
;
P11036; Q2M989
)
|
|
- Protein name
|
RecName: Full=HTH-type transcriptional regulator tdcA; AltName: Full=Tdc operon transcriptional activator;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=tdcA; OrderedLocusNames=b3118, JW3089;
|
|
MMBR References
|
J Bacteriol. 1997;179:4868-4873
Involvement of Fnr and ArcA in anaerobic expression of the tdc operon of Escherichia coli.
Chattopadhyay, S., Y. Wu, and P. Datta.
|
| Sequences |
Amino acid
FASTA format
|
0001 MSTILLPKTQ HLVVFQEVIR SGSIGSAAKE LGLTQPAVSK IINDIEDYFG VELVVRKNTG VTLTPAGQLL
0071 LSRSESITRE MKNMVNEISG MSSEAVVEVS FGFPSLIGFT FMSGMINKFK EVFPKAQVSM YEAQLSSFLP
0141 AIRDGRLDFA IGTLSAEMKL QDLHVEPLFE SEFVLVASKS RTCTGTTTLE SLKNEQWVLP QTNMGYYSEL
0211 LTTLQRNGIS IENIVKTDSV VTIYNLVLNA DFLTVIPCDM TSPFGSNQFI TIPVEETLPV AQYAAVWSKN
0281 YRIKKAASVL VELAKEYSSY NGCRRRQLIE VG
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ggaaagtatt gaaagttaat ttgtgagtgg
-070 tcgcacatat cctgttcatt tcattttgat acacttcatg ccgtcaatga ggtaattaac gtaggtcgtt
0001 atgagcacta ttcttcttcc gaaaacgcag cacctggtag tctttcagga agtcattaga agtggttcta
0071 tcggctcggc tgcaaaagaa ttagggttaa ctcaaccggc cgtcagtaaa atcattaacg atattgaaga
0141 ttattttggt gtggaattag tggtgcggaa aaataccggt gtaacattaa cacctgccgg tcaattgtta
0211 ctctcccgtt ccgaatccat tacccgtgaa atgaaaaata tggttaatga gataagcggt atgtcttctg
0281 aggcggtggt ggaagtctca tttggttttc cttcattgat tggttttact tttatgtcag ggatgatcaa
0351 caagttcaaa gaggtgttcc cgaaagcgca ggtttctatg tatgaagcgc aactgtcttc gttcttaccg
0421 gcaatccgcg acggtcgact ggattttgcg attggtacgt taagtgcaga aatgaagctt caggatttac
0491 atgttgagcc gctgttcgag tccgagtttg tgctggtagc cagtaagtcc cgaacatgca ccggcaccac
0561 cacgctggag tcgttgaaga acgaacagtg ggtgttgcca caaactaata tggggtacta cagcgaactg
0631 cttactacgt tacaaagaaa tggcatcagt attgaaaaca tcgttaaaac cgactcagtc gtgacaattt
0701 ataatcttgt tctcaatgct gatttcttaa ctgtaattcc ttgtgatatg acgtcacctt ttggttctaa
0771 tcaatttatt actattccgg ttgaagaaac attacctgtg gcacaatatg ccgcggtatg gtcgaaaaat
0841 tatcgtatta aaaaagcagc atcggttttg gtggaattag ccaaagagta ttcatcttat aatgggtgta
0911 gacgaaggca attaatagaa gttggttagt tatttgtttt tatttaaaca taaataatcc acctgtctgt
0981 cttgcaggtg tcggttacgg ttacctacat atttaattca ggcgaagagg ttttataat
|
