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PEC Original Annotations
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Essentiality
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Class
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non-essential
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|
References (PMID)
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|
|
Related gene (MG1655 PEC)
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|
Gene Search
|
Search MG1655 PEC by gene name:
ygfI
|
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Related strains
|
|
Strains Search
|
Search strains by gene name:
ygfI
Search strains by all related name:
ygfI b2921 ECK2917 JW5476
|
General information (Go to Linear View: )
|
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Gene Name
|
ygfI
|
|
Alternative name
|
b2921,ECK2917,JW5476
|
|
Location, Length
|
3,064,933 - 3,065,829
(
-
)
;
65.96
min
;
897
(bp) ,
298
(aa)
|
|
Product
|
predicted DNA-binding transcriptional regulator
|
|
Note
|
ECK2917:JW5476:b2921
|
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Function
|
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PID
|
85675732
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YGFI_ECOLI
(
P52044
;
Q2M9S1
)
|
|
- Protein name
|
RecName: Full=Uncharacterized HTH-type transcriptional regulator ygfI;
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- Synonyms
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- Gene name
|
Name=ygfI; OrderedLocusNames=b2921, JW5476;
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Homology Analysis
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BLAST
|
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Bacteria
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|
GTOP
|
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PDB
|
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PSI-BLAST
|
|
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SWISS-PROT
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BLAST
|
|
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PSI-BLAST
|
|
|
nr
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BLAST
|
ORF_f303
|
|
Pfam 27.0
(database updated :
2013-03
)
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|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MDIFISKKMR NFILLAQTNN IARAAEKIHM TASPFGKSIA ALEEQIGYTL FTRKDNNISL NKAGQELYQK
0071 LFPVYQRLSA IDNEIHNSGR RSREIVIGID NTYPTIIFDQ LISLGDKYEG VTAQPVEFSE NGVIDNLFDR
0141 QLDFIISPQH VSARVQELEN LTISELPPLR LGFLVSRRYE ERQEQELLQE LPWLQMRFQN RANFEAMIDA
0211 NMRPCGINPT IIYRPYSFMA KISAVERGHF LTVIPHFAWR LVNPATLKYF DAPHRPMYMQ EYLYSIRNHR
0281 YTATMLQHIA EDRDGTSH
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tttctgtaaa accatgacgt aatcacctat
-070 ctttgctcgc ggtttcatca aggataggct gactgaaacg gttaagcgga caaggatgcg ggggaggggg
0001 atggacattt ttatttcgaa aaagatgcgc aatttcattt tattagcgca aaccaataat attgcccggg
0071 cggcagaaaa aatccatatg acggcttcgc catttggtaa aagcattgcc gcgctggaag aacaaattgg
0141 ctatacgcta tttacccgca aagataataa tatcagcctc aataaagccg gacaggaact gtatcaaaaa
0211 ctgttcccgg tttatcaacg gctttctgcg attgataatg aaatccataa ctcagggcgt cgttcacgag
0281 aaattgtgat tggcatagat aatacttatc cgacaattat tttcgatcag ttgattagtc tcggagataa
0351 gtatgaaggc gtgaccgccc agccagttga gttcagcgaa aatggcgtta tcgataatct ttttgaccgc
0421 cagttagatt ttattatctc cccacagcat gtatctgcac gagttcagga actggaaaac ctgactatca
0491 gtgaactacc accgctgcga ttaggctttc tcgtttctcg ccgttatgaa gagcgacaag agcaagagct
0561 gcttcaggag ctgccctggc tacaaatgcg ctttcagaac cgggccaact tcgaagcaat gattgatgcg
0631 aatatgcgac cttgtgggat caatccaacc attatttatc gtccctacag ttttatggcc aaaatcagcg
0701 ccgtggagcg cggacatttt ctgacggtga tcccgcattt tgcctggcga ctggtgaatc cggcaacgct
0771 gaaatatttt gatgcaccgc acaggccgat gtatatgcag gaatatcttt attcaatcag aaatcatcgt
0841 tataccgcca cgatgcttca gcatattgct gaagatcgtg acgggacgag tcattaaccc agcatcgagc
0911 cggttgcaat taaattacgg tgtaagtcga agacgtggct aagatcgtgg tgaatatgtc cgccaggcgc
0981 attttccaga tagcgat
|
