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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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J Bacteriol. 1998;180(11):2915-23.
Characterization of the hca cluster encoding the dioxygenolytic pathway for initial catabolism of 3-phenylpropionic acid in Escherichia coli K-12.
Diaz E, Ferrandez A, Garcia JL.
(
9603882
)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
hcaR
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Related strains
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Strains Search
|
Search strains by gene name:
hcaR
Search strains by all related name:
hcaR b2537 ECK2534 JW2521 phdR yfhT
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General information (Go to Linear View: )
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Gene Name
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hcaR
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Alternative name
|
b2537,ECK2534,JW2521,phdR,yfhT
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Location, Length
|
2,666,662 - 2,667,552
(
-
)
;
57.39
min
;
891
(bp) ,
296
(aa)
|
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Product
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DNA-binding transcriptional regulator
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Note
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ECK2534:JW2521:b2537
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Function
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PID
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85675441
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
HCAR_ECOLI
(
Q47141
;
P76583; P77167
)
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- Protein name
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RecName: Full=Hca operon transcriptional activator;
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- Synonyms
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- Gene name
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Name=hcaR; Synonyms=phdR, yfhT; OrderedLocusNames=b2537, JW2521;
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| Sequences |
Amino acid
FASTA format
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0001 MELRHLRYFV AVAQALNFTR AAEKLHTSQP SLSSQIRDLE NCVGVPLLVR DKRKVALTAA GECFLQDALA
0071 ILEQAENAKL RARKIVQEDR QLTIGFVPSA EVNLLPKVLP MFRLRQPDTL IELVSLITTQ QEEKIRRGEL
0141 DVGLMRHPVY SPEIDYLELF DEPLVVVLPV DHPLAHEKEI TAAQLDGVNF VSTDPVYSGS LAPIVKAWFA
0211 QENSQPNIVQ VATNILVTMN LVGMGLGVTL IPGYMNNFNT GQVVFRPIAG NVPSIALLMA WKKGEMKPAL
0281 RDFIAIVQER LASVTA
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tctatttttg tgccataagg atgttgctgg
-070 ttggttgcta atatgtgaaa tagttaattt ctaccagctg agacgttttt tcgataacaa ggggaaggtg
0001 atggaactac ggcatttacg ctatttcgtc gcagtggcgc aggcactgaa ctttacccgt gcggcggaaa
0071 aactgcatac ctcacagcct tcgttaagca gccagatccg cgatcttgaa aactgtgtcg gtgttccgtt
0141 actggtgagg gataagcgca aagtcgcgtt gacggcggcg ggagaatgtt ttctccagga cgcgctggca
0211 atcctcgaac aagcggaaaa tgccaaatta cgggcgcgga aaattgttca ggaagacaga caattaacca
0281 ttggctttgt gccatcggcg gaagtgaatt tactgccaaa agtattaccg atgtttcgtc tcagacagcc
0351 agacaccttg attgagctgg tgagtttaat caccacgcaa caggaggaaa aaattcgccg tggtgaactc
0421 gacgtcggct taatgcgcca tcctgtttat agcccggaga ttgattatct ggagcttttt gacgaaccat
0491 tagtggttgt gttaccggtt gatcaccctt tagcacatga aaaagagatc accgccgcgc aactggatgg
0561 cgtgaatttc gtcagtaccg atccggtgta ttccggttcg cttgcgccga tcgttaaagc gtggtttgcg
0631 caagaaaaca gccagccaaa tatcgtccag gtggcaacga atattctggt gaccatgaat ctggtgggca
0701 tggggctggg cgtcactttg atacccggtt atatgaataa ttttaatacc ggacaggttg tttttcgtcc
0771 cattgccgga aatgtgcctt ccattgcttt actgatggcg tggaagaaag gggagatgaa gccggcatta
0841 cgcgatttca tcgccattgt gcaggaacgt ttggcaagcg taacggcata attacgcatt atttttgcaa
0911 catgcgtcgc ggatctcagt tttttagtgc ttgtgaactg gcgttacaga catcgggaag caggctcgaa
0981 tattcttatt t
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