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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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|
|
Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
yfeR
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yfeR
Search strains by all related name:
yfeR b2409 ECK2403 JW2400 osmT
|
General information (Go to Linear View: )
|
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Gene Name
|
yfeR
|
|
Alternative name
|
b2409,ECK2403,JW2400,osmT
|
|
Location, Length
|
2,531,376 - 2,532,302
(
-
)
;
54.48
min
;
927
(bp) ,
308
(aa)
|
|
Product
|
predicted DNA-binding transcriptional regulator
|
|
Note
|
ECK2403:JW2400:b2409
|
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Function
|
|
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PID
|
1799823
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YFER_ECOLI
(
P0ACR7
;
P77500
)
|
|
- Protein name
|
RecName: Full=Uncharacterized HTH-type transcriptional regulator yfeR;
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- Synonyms
|
|
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- Gene name
|
Name=yfeR; OrderedLocusNames=b2409, JW2400;
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Homology Analysis
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BLAST
|
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Bacteria
|
|
GTOP
|
|
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PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
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PSI-BLAST
|
|
|
nr
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BLAST
|
predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MNYSLKQLKV FVTVAQEKSF SRAGERIGLS QSAVSHSVKE LENHTGVRLL DRTTREVVLT DAGQQLALRL
0071 ERLLDELNST LRDTGRMGQQ LSGKVRVAAS QTISAHLIPQ CIAESHRRYP DIQFVLHDRP QQWVMESIRQ
0141 GDVDFGIVID PGPVGDLQCE AILSEPFFLL CHRDSALAVE DYVPWQALQG AKLVLQDYAS GSRPLIDAAL
0211 ARNGIQANIV QEIGHPATLF PMVAAGIGIS ILPALALPLP EGSPLVVKRI TPVVERQLML VRRKNRSLST
0281 AAEALWDVVR DQGNALMAGR EGDPLYQI
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 aaaagtttca taaagactcc agatgatcga
-070 tggttctatt gtgcttcttc cagtttgaga aataaaattg atttattgca tccattcatg aagaaaacag
0001 atgaattatt ctttaaaaca attaaaggtt ttcgtcacag tagcgcagga gaaaagtttt agtcgtgcag
0071 gagagcgtat cggcctgagc cagtcggcag tgagtcacag tgtgaaggaa ctggaaaatc atactggtgt
0141 tcgcctgctg gacagaacca cgcgtgaagt ggtgcttaca gatgcagggc agcagctggc tttgcgtctt
0211 gagcgactgc tggatgaact gaacagcacg ttgcgcgata ccgggcgtat ggggcaacaa ctgagcggaa
0281 aagttcgggt cgctgccagc cagaccattt ccgcgcatct tattccgcaa tgcattgctg aaagccatcg
0351 ccgctatcca gatattcagt ttgtcctgca cgatcgtccg cagcagtggg taatggaaag tattcgccag
0421 ggagatgtcg attttggcat cgtcatcgat ccaggcccag tgggcgatct gcaatgtgaa gcgattcttt
0491 ccgagccttt ctttctgctt tgccatcgcg atagcgcttt ggccgtggaa gattatgtac cctggcaggc
0561 attacaggga gcgaaattgg tgttgcagga ttacgcgtca ggcagccgac cgctgattga cgcagcgctg
0631 gcgcgcaatg gtattcaggc gaatattgtg caggagattg gacatccggc gacgctgttc ccgatggtag
0701 ccgcaggcat cggcatcagt attcttcccg cactggcgct accattgcct gaaggtagcc cactggtggt
0771 aaagcgcatt acgccggttg ttgaacgcca gttgatgctg gtgcgcagga agaaccgttc actttccacc
0841 gccgctgaag ctttatggga cgtggtacga gaccagggca atgcgctaat ggctgggcgg gaaggggatc
0911 cgttgtatca gatatagagt gaattcatac tgccgggagc cccggcagta atcaatcaga agttaaattt
0981 gatggagtag attatcgcat cctggtaaaa atcttcgccc agtttgt
|
