MG1655
W3110
Search for
  Japanese | English
Gene Report : ypdD
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
Related gene (MG1655 PEC)
     Gene Search Search MG1655 PEC by gene name:  ypdD
Related strains
     Strains Search Search strains by gene name:  ypdD   Search strains by all related name:  ypdD b2383 ECK2379 f831 fryA JW2380

General information  (Go to Linear View:)
 Gene Name ypdD  
 Alternative name b2383,ECK2379,f831,fryA,JW2380  
 Location, Length 2,507,436 - 2,509,931 (  -  ) ;   53.97 min ; 2496 (bp) ,   831 (aa) Go to Linear View
 Product fused predicted PTS enzymes Hpr component, enzyme I component, and enzyme IIA component  
 Note ECK2379:JW2380:b2383  
 Function  
 PID 1799794  
SWISS-PROT  ( Show details )
  botton Entry name(Acc.no) PTFX1_ECOLI ( P77439 )
    -  Protein name RecName: Full=Multiphosphoryl transfer protein 1; Short=MTP 1; Includes: RecName: Full=Phosphoenolpyruvate-protein phosphotransferase; EC=2.7.3.9; AltName: Full=Phosphotransferase system enzyme I; Includes: RecName: Full=Phosphocarrier protein HPr; Short=Protein H; Includes: RecName: Full=Fructose-like phosphotransferase enzyme IIA component 2; EC=2.7.1.-; AltName: Full=PTS system fructose-like EIIA component 2;  
    -  Synonyms  
    -  Gene name Name=fryA; Synonyms=ypdD; OrderedLocusNames=b2383, JW2380;  

 Linear View
View Location
   2495.0  –  2520.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB
         PSI-BLAST  
    SWISS-PROT
         BLAST RecName: Full=Multiphosphoryl transfer protein; Short=MTP; Includes: RecName: Full=Phosphoenolpyruvate-protein phosphotransferase; AltName: Full=Phosphotransferase system enzyme I; Includes: RecName: Full=Phosphocarrier protein HPr; Short=Protein H; Includes: RecName: Full=Fructose-like phosphotransferase enzyme IIA component; AltName: Full=PTS system fructose-like EIIA component  
        PSI-BLAST
    nr
         BLAST fused predicted PTS enzymes: Hpr component/enzyme I component/enzyme IIA component [Escherichia coli str. K-12 substr. MG1655]  
Pfam 27.0   (database updated : 2013-03 )
    Pfam

Other Cross-Reference
    EcoCyc ypdD 

Sequences
Amino acid
FASTA format
0001 MLTIQFLCPL PNGLHARPAW ELKEQCSQWQ SEITFINHRQ NAKADAKSSL ALIGTGTLFN DSCSLNISGS 
0071 DEEQARRVLE EYIQVRFIDS DSVQPTQAEL TAHPLPRSLS RLNPDLLYGN VLASGVGVGT LTLLQSDSLD 
0141 SYRAIPASAQ DSTRLEHSLA TLAEQLNQQL RERDGESKTI LSAHLSLIQD DEFAGNIRRL MTEQHQGLGA 
0211 AIISNMEQVC AKLSASASDY LRERVSDIRD ISEQLLHITW PELKPRNKLV LEKPTILVAE DLTPSQFLSL 
0281 DLKNLAGMIL EKTGRTSHTL ILARASAIPV LSGLPLDAIA RYAGQPAVLD AQCGVLAINP NDAVSGYYQV 
0351 AQTLADKRQK QQAQAAAQLA YSRDNKRIDI AANIGTALEA PGAFANGAEG VGLFRTEMLY MDRDSAPDEQ 
0421 EQFEAYQQVL LAAGDKPIIF RTMDIGGDKS IPYLNIPQEE NPFLGYRAVR IYPEFAGLFR TQLRAILRAA 
0491 SFGNAQLMIP MVHSLDQILW VKGEIQKAIV ELKRDGLRHA ETITLGIMVE VPSVCYIIDH FCDEVDFFSI 
0561 GSNDMTQYLY AVDRNNPRVS PLYNPITPSF LRMLQQIVTT AHQRGKWVGI CGELGGESRY LPLLLGLGLD 
0631 ELSMSSPRIP AVKSQLRQLD SEACRELARQ ACECRSAQEI EALLTAFTPE EDVRPLLALE NIFVDQDFSN 
0701 KEQAIQFLCG NLGVNGRTEH PFELEEDVWQ REEIVTTGVG FGVAIPHTKS QWIRHSSISI ARLAKPIGWQ 
0771 SEMGEVELVI MLTLGANEGM NHVKVFSQLA RKLVNKNFRQ SLFAAQDAQS ILTLLETELT F

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             gatgcagcaa cttttatctg cccttattca 
-070 acgtcttacg cgtgagacgg ttgttcaact gacggatttc agatgatctc ctgattaacc cggagcggtt 
0001 atgttaacga ttcaatttct ctgtcctttg cctaacggtc tacatgctcg tccggcgtgg gaacttaaag 
0071 aacagtgcag ccagtggcaa agcgaaatca cttttattaa ccatcgccag aacgcaaagg cagatgcgaa 
0141 aagctcgctg gcgctgattg gcaccggcac cctatttaat gacagttgca gcctgaacat tagcggcagc 
0211 gatgaagagc aggcgcggcg cgtgctggaa gagtacatcc aggtgcgctt tatcgacagc gacagcgttc 
0281 agcctacgca ggcagaactg acggcgcatc cgctgccgcg ttcattaagc cgccttaacc cggatttact 
0351 gtacggcaat gtgctggcaa gcggcgtcgg cgtgggtacg ctgaccctgt tacaaagcga cagcctcgac 
0421 agttatcggg caatccccgc cagtgcgcaa gattccaccc ggctggagca cagcctggca acgcttgccg 
0491 agcaactgaa ccagcaattg cgtgagcgtg acggcgaaag caaaactatc ctcagcgccc atttgtcgct 
0561 gattcaggat gatgaatttg caggcaatat ccgtcgcctg atgacagaac agcatcaggg gctgggggcg 
0631 gcgatcatca gcaatatgga gcaggtttgc gccaaacttt ctgcctctgc cagcgattat ctgcgcgaac 
0701 gtgttagcga cattcgcgat atcagcgaac agttgctgca tatcacctgg ccggaactga agccgcgcaa 
0771 caagctggtg cttgaaaaac cgaccattct ggtggctgaa gatttaaccc caagccagtt tttgagcctt 
0841 gatttgaaaa atcttgcggg catgattctg gagaaaaccg ggcgcacctc gcatacactg attctggccc 
0911 gtgcctcggc gatcccggta ctgagtggct tgccgctgga tgcgattgcc cgttatgccg ggcaacctgc 
0981 agtgcttgac gcccagtgcg gcgtgctggc gattaacccg aatgacgcgg tgagcggtta ttatcaggtc 
1051 gcgcagacgc tggcggataa acgccaaaaa caacaggcgc aggctgccgc gcagctggcc tattcccgtg 
1121 ataacaagcg tattgatatt gcggcgaata tcggcaccgc tctggaagcg ccaggcgcgt ttgccaacgg 
1191 cgcggaaggt gtcgggctgt tccgtaccga aatgctctat atggatcgcg acagcgcgcc ggacgagcag 
1261 gagcaatttg aagcctacca gcaggtgcta ctggcggcgg gcgacaagcc gattatcttc cgcacgatgg 
1331 acatcggcgg cgataaaagc attccttatc tgaatattcc ccaggaagag aacccgttcc tcggctatcg 
1401 cgcggtacgt atttacccgg aatttgctgg cctgttccgc actcaactgc gggccatttt gcgcgccgcc 
1471 agtttcggca acgcccagtt gatgatcccg atggttcaca gcctcgatca gatcttatgg gtgaaaggcg 
1541 agatccaaaa agcgatcgtt gagcttaagc gcgatggcct gcgtcatgca gagacgatta cgcttgggat 
1611 catggtggaa gttccgtcgg tgtgctacat catcgaccac ttctgcgatg aggtcgattt cttcagtatc 
1681 ggctccaacg atatgaccca gtatctgtat gcggtcgatc gtaataaccc gcgcgtatcg ccgctatata 
1751 acccgattac gccatcgttc ctgcgcatgt tgcagcaaat agttaccact gcgcatcagc ggggcaaatg 
1821 ggtaggcatt tgcggtgaac tgggcggtga aagccgttat ctgccgctac tgcttgggct gggcctggat 
1891 gagctgagta tgagtagccc gcgtattccg gcggtgaaaa gccagcttcg tcaactggat agcgaggcgt 
1961 gtcgggaact ggcgcgtcag gcatgtgaat gccgcagtgc gcaggaaatt gaagcgttac tcaccgcctt 
2031 tacgccggaa gaagacgttc gcccactgct ggcgctggag aatatctttg ttgatcagga ttttagcaat 
2101 aaagagcagg cgatccagtt cctgtgcggc aacctcggcg ttaacgggcg cactgaacat ccgtttgagc 
2171 tggaagaaga tgtctggcag cgggaagaga ttgttaccac cggcgttggt tttggcgtag cgatcccgca 
2241 caccaaatct cagtggatcc gtcattccag tatcagcatt gcccggctgg cgaaaccgat tggctggcag 
2311 tcagaaatgg gcgaagtcga actggtgatc atgctgacgc tgggtgctaa cgaagggatg aatcatgtga 
2381 aagtcttctc gcagctggcg cgtaaactgg tgaataaaaa cttccgccag tcgttgtttg ccgcgcaaga 
2451 tgcacaaagt atcctgacgc tgctggaaac agaattaacc ttctgacgtt agccctgaaa acgggcgctg 
2521 tactctcccg gcgtcagacc aaactgacgc cggaaaacgc gacaaaaata gtcgctatcc ggaaaaccgc 
2591 aacgct