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PEC Original Annotations
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|
Essentiality
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Class
|
non-essential
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|
References (PMID)
|
J Bacteriol. 1975;121(3):1092-101.
Positive control in the D-serine deaminase system of Escherichia coli K-12.
Bloom FR, McFall E, Young MC, Carothers AM.
(
1090589
)
|
|
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Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
dsdC
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
dsdC
Search strains by all related name:
dsdC b2364 ECK2360 JW2361
|
General information (Go to Linear View: )
|
|
Gene Name
|
dsdC
|
|
Alternative name
|
b2364,ECK2360,JW2361
|
|
Location, Length
|
2,482,140 - 2,483,075
(
-
)
;
53.42
min
;
936
(bp) ,
311
(aa)
|
|
Product
|
DNA-binding transcriptional dual regulator
|
|
Note
|
ECK2360:JW2361:b2364
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Function
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PID
|
1799763
|
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
DSDC_ECOLI
(
P46068
;
P77443
)
|
|
- Protein name
|
RecName: Full=HTH-type transcriptional regulator dsdC; AltName: Full=D-serine deaminase activator;
|
|
- Synonyms
|
|
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- Gene name
|
Name=dsdC; OrderedLocusNames=b2364, JW2361;
|
| Sequences |
Amino acid
FASTA format
|
0001 MEPLREIRNR LLNGWQLSKM HTFEVAARHQ SFALAAEELS LSPSAVSHRI NQLEEELGIQ LFVRSHRKVE
0071 LTHEGKRVYW ALKSSLDTLN QEILDIKNQE LSGTLTLYSR PSIAQCWLVP ALGDFTRRYP SISLTVLTGN
0141 DNVNLQRAGI DLAIYFDDAP SAQLTHHFLM DEEILPVCSP EYAQRHALTN TVINLCHCTL LHDRQAWSND
0211 SGTDEWHSWA QHYAVNLPTS SGIGFDRSDL AVIAAMNHIG VAMGRKRLVQ KRLASGELVA PFGDMTVKCH
0281 QHYYITTLPG RQWPKIEAFI IWLREQVKTT S
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ctaaaaatga aggtgaattg agatatggtt
-070 cactttagct catctcatag ctgaaatttt gccgctattt ttttacactt aagcgaaaaa tgaggtgatt
0001 atggaacccc ttcgtgaaat aagaaatcgg ctgcttaacg gctggcaatt atcaaaaatg catacttttg
0071 aagtggctgc caggcatcag tccttcgccc tggcggcaga ggaattgtcg ctgagcccca gtgcggtaag
0141 tcaccgtatc aatcagctgg aagaagaatt gggcattcag ttgtttgttc gttcccatcg caaagtggaa
0211 ttaacgcacg aggggaaacg tgtttattgg gcgctaaaat cgtcgctgga taccctgaac caggaaattc
0281 ttgatatcaa aaatcaggag ttatcgggaa cgttaactct gtattcccgg ccctctatcg cccaatgctg
0351 gttggtgccc gcattaggtg actttacacg ccggtatccg tctatttcgc tcaccgtgct cactggtaat
0421 gacaacgtca atctgcaacg tgccggaatc gatttggcga tctactttga tgatgcgccg tcagcgcaac
0491 tcactcatca ctttctgatg gatgaagaaa tcctgccagt atgtagcccg gaatacgctc aaagacatgc
0561 tttaaccaac acggtaatta acctgtgtca ctgtacgttg ctccatgaca gacaggcatg gagcaacgac
0631 tccggtacgg atgaatggca tagttgggcg caacattatg cggttaattt gccgacatct tctggaattg
0701 gctttgatcg ttctgattta gctgttattg ccgcgatgaa tcatattggg gtggcgatgg gaagaaaacg
0771 cctggtacaa aaaaggcttg ccagtggtga gctcgtcgcg ccgtttggcg atatgacggt gaaatgccat
0841 cagcattatt acatcaccac attaccgggc aggcagtggc caaaaattga agcgtttatt atctggctaa
0911 gagaacaggt aaaaaccact tcataatgaa taaaaccacg agttcctggt gtgccttatt cggcctgcta
0981 gttcgaattt aatttacggt ttttatgtgg ttttagggat aaacacaagg atggtg
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