MG1655
W3110
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Gene Report : ydhB
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
Related gene (MG1655 PEC)
     Gene Search Search MG1655 PEC by gene name:  ydhB
Related strains
     Strains Search Search strains by gene name:  ydhB   Search strains by all related name:  ydhB b1659 ECK1655 JW1651

General information  (Go to Linear View:)
 Gene Name ydhB  
 Alternative name b1659,ECK1655,JW1651  
 Location, Length 1,740,580 - 1,741,512 (  -  ) ;   37.46 min ; 933 (bp) ,   310 (aa) Go to Linear View
 Product predicted DNA-binding transcriptional regulator  
 Note ECK1655:JW1651:b1659  
 Function  
 PID 85675065  
SWISS-PROT  ( Show details )
  botton Entry name(Acc.no) YDHB_ECOLI ( P0ACR2 ; P37598; P77677 )
    -  Protein name RecName: Full=Uncharacterized HTH-type transcriptional regulator ydhB;  
    -  Synonyms  
    -  Gene name Name=ydhB; OrderedLocusNames=b1659, JW1651;  

 Linear View
View Location
   1730.0  –  1755.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB
         PSI-BLAST  
    SWISS-PROT
         BLAST RecName: Full=Uncharacterized HTH-type transcriptional regulator ydhB  
        PSI-BLAST
    nr
         BLAST putative DNA-binding transcriptional regulator [Escherichia coli O157:H7 EDL933]  
Pfam 27.0   (database updated : 2013-03 )
    Pfam

Other Cross-Reference
    EcoCyc ydhB 

Sequences
Amino acid
FASTA format
0001 MWSEYSLEVV DAVARNGSFS AAAQELHRVP SAVSYTVRQL EEWLAVPLFE RRHRDVELTA AGAWFLKEGR 
0071 SVVKKMQITR QQCQQIANGW RGQLAIAVDN IVRPERTRQM IVDFYRHFDD VELLVFQEVF NGVWDALSDG 
0141 RVELAIGATR AIPVGGRYAF RDMGMLSWSC VVASHHPLAL MDGPFSDDTL RNWPSLVRED TSRTLPKRIT 
0211 WLLDNQKRVV VPDWESSATC ISAGLCIGMV PTHFAKPWLN EGKWVALELE NPFPDSACCL TWQQNDMSPA 
0281 LTWLLEYLGD SETLNKEWLR EPEETPATGD 

Nucleotide
FASTA format

View sequence out neighbor 100bp
-100                                             aatctctcaa ttaaacaccg ccgcaaagtg 
-070 tagggagtga aattagtgtt gtgaaacggt aatatttgat gactggtttc aaaaattttg caggcagact 
0001 atgtggtcag aatattcact cgaagttgtt gatgcggtag cgcgtaatgg tagttttagc gctgcggcac 
0071 aggagctgca tcgcgttcct tctgcggtca gctataccgt gcgtcagctg gaagagtggc tggcggtgcc 
0141 gctctttgaa cgacggcacc gtgatgtgga gctgaccgct gctggagcgt ggtttctcaa agaagggcgc 
0211 tctgttgtca aaaaaatgca gatcacccgc cagcaatgtc agcagatagc gaacggctgg cgcggtcagt 
0281 tagctatcgc agtggataat attgtcaggc cagaacgtac acggcagatg atcgttgatt tttatcgcca 
0351 ttttgatgat gtcgaacttc ttgtctttca ggaagtgttc aacggtgtct gggatgcgct ttccgacggg 
0421 cgcgtggaac tggcgattgg cgcaacacgc gcgattccgg taggcggtcg ttatgccttc cgggatatgg 
0491 ggatgctaag ctggagttgc gttgttgcca gtcaccaccc gctggcgttg atggatggcc cgttcagcga 
0561 tgatacgttg cgcaactggc cgtcgttggt gcgcgaagac acctcgcgaa cgctacctaa acgtattacc 
0631 tggttgctgg ataaccaaaa aagagttgtc gtgcctgact gggaatcatc ggcaacctgt atctcggcag 
0701 gattatgcat agggatggtg ccaacacatt tcgccaaacc gtggcttaat gaggggaagt gggtagcatt 
0771 agaactggaa aacccctttc cggattcggc atgttgtctg acatggcagc aaaatgatat gtcgcctgcg 
0841 ttaacctggt tgcttgagta tctcggcgat agtgagacgc tgaataagga gtggctgcgg gagccggaag 
0911 agactcccgc aacgggtgat taacgacgat agtcgcggaa cgggccgtca gccacggagc ggcgttcaat 
0981 caagcgcgga tgcacttcaa tagactgcgg ttcttcacgt ttgttgacga tac