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PEC Original Annotations
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Essentiality
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Class
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non-essential
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|
References (PMID)
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|
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
ynfL
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ynfL
Search strains by all related name:
ynfL b1595 ECK1590 JW1587
|
General information (Go to Linear View: )
|
|
Gene Name
|
ynfL
|
|
Alternative name
|
b1595,ECK1590,JW1587
|
|
Location, Length
|
1,670,413 - 1,671,306
(
-
)
;
35.95
min
;
894
(bp) ,
297
(aa)
|
|
Product
|
predicted DNA-binding transcriptional regulator
|
|
Note
|
ECK1590:JW1587:b1595
|
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Function
|
|
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PID
|
1742618
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YNFL_ECOLI
(
P77559
)
|
|
- Protein name
|
RecName: Full=Uncharacterized HTH-type transcriptional regulator ynfL;
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- Synonyms
|
|
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- Gene name
|
Name=ynfL; OrderedLocusNames=b1595, JW1587;
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Homology Analysis
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BLAST
|
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Bacteria
|
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GTOP
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|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
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BLAST
|
predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MNIELRHLRY FVAVAEELHF GRAAARLNIS QPPLSQQIQA LEQQIGARLL ARTNRSVLLT AAGKQFLADS
0071 RQILSMVDDA AARAERLHQG EAGELRIGFT SSAPFIRAVS DTLSLFRRDY PDVHLQTREM NTREQIAPLI
0141 EGTLDMGLLR NTALPESLEH AVIVHEPLMA MIPHDHPLAN NPNVTLAELA KEPFVFFDPH VGTGLYDDIL
0211 GLMRRYHLTP VITQEVGEAM TIIGLVSAGL GVSILPASFK RVQLNEMRWV PIAEEDAVSE MWLVWPKHHE
0281 QSPAARNFRI HLLNALR
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tccttgctaa atatgcctgt agatcaggct
-070 tatacatagg gtaggaaaat cgaattgttc tgtctaatat attaataatc tcaaataaga tgttttaaat
0001 atgaatattg aacttcgtca tctgcgttac tttgttgctg ttgcggaaga gctgcatttc gggcgcgccg
0071 ctgcccgcct gaatatttcg caaccgccgc taagtcagca gattcaggcg ctggagcaac aaattggtgc
0141 ccgactgctg gcacgaacca atcgcagtgt attgctgacg gcagcaggaa aacagtttct tgcagatagt
0211 cggcaaatcc tgtctatggt ggatgacgct gccgctcgcg ctgaaaggct gcatcagggt gaagcggggg
0281 agttgcgcat tggttttact tcgtcggctc cttttattcg ggcggtgtcc gatacgttat cgctgtttcg
0351 ccgtgattat cctgatgtcc atttacaaac ccgcgaaatg aacactcgcg agcaaatcgc tccgctcatt
0421 gaaggaacgc tggatatggg attgctgcgt aacacagcgt taccggagtc gcttgaacac gcagtcatcg
0491 tccatgaacc gcttatggcg atgatcccgc acgatcatcc cctggcaaat aacccgaatg taacgctggc
0561 tgaactggcg aaagaaccct ttgtcttttt tgatccgcac gtcgggacag ggctgtatga cgatattctc
0631 gggctgatgc gacgttacca tttgacgccc gtcatcactc aggaggtggg cgaggcaatg accatcatcg
0701 gtctggtttc cgccggtctg ggtgtttcaa ttttgcctgc gtcatttaaa cgtgttcagc tcaacgaaat
0771 gcgctgggtg ccgattgctg aagaggatgc ggtttctgaa atgtggttgg tctggccgaa acatcatgaa
0841 caaagtccgg ctgcgcgtaa ctttcgtatt catctgctga atgctctcag gtgagggaaa tttcagcgaa
0911 aaagcccgaa aaatgtgctg ttaatcacat gcctaagtaa aaatttgacg acacgtattg aagtgcttca
0981 ccatagccta caga
|
