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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
yneJ
|
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Related strains
|
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Strains Search
|
Search strains by gene name:
yneJ
Search strains by all related name:
yneJ b1526 ECK1519 JW1519
|
General information (Go to Linear View: )
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Gene Name
|
yneJ
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|
Alternative name
|
b1526,ECK1519,JW1519
|
|
Location, Length
|
1,616,518 - 1,617,399
(
+
)
;
34.79
min
;
882
(bp) ,
293
(aa)
|
|
Product
|
predicted DNA-binding transcriptional regulator
|
|
Note
|
ECK1519:JW1519:b1526
|
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Function
|
|
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PID
|
1742500
|
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YNEJ_ECOLI
(
P77309
)
|
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- Protein name
|
RecName: Full=Uncharacterized HTH-type transcriptional regulator yneJ;
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- Synonyms
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- Gene name
|
Name=yneJ; OrderedLocusNames=b1526, JW1519;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
|
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PSI-BLAST
|
|
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SWISS-PROT
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BLAST
|
|
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PSI-BLAST
|
|
|
nr
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BLAST
|
predicted DNA-binding transcriptional regulator [Escherichia coli str. K-12 substr. MG1655]
|
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Pfam 27.0
(database updated :
2013-03
)
|
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Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MDLTQLEMFN AVAEAGSITQ AAAKVHRVPS NLTTRLRQLE TELGVDLFIR ENQRLRLSPA GHNFLRYSQQ
0071 ILALVDEARS VVAGDEPQGL FSLGSLESTA AVRIPATLAE FNRRYPKIQF SLSTGPSGTM LDGVLEGKLN
0141 AAFIDGPINH TAIDGIPVYR EELMIVTPQG YAPVTRASQV NGSNIYAFRA NCSYRRHFES WFHADGAAPG
0211 TIHEMESYHG MLACVIAGAG IALIPRSMLE SMPGHHQVEA WPLAEQWRWL TTWLVWRRGA KTRPLEAFIQ
0281 LLDVPDSARQ GYQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CGGGGTATCT CCTTTATGAG TCATGGTATG
-070 AAGATACGCA GATTTACTCT TGCTTTAAAA TGAATAATAT TAAGCCACTT ATTCACGAAT CGAGAATGCT
0001 atggatctga cccaactgga gatgttcaac gcggttgccg aagctggcag cataacccag gctgcagcaa
0071 aagtgcatcg cgtgccgtcg aatctcacta cccgtctgcg ccagctggaa acagaactgg gggttgatct
0141 gtttattcgc gagaatcagc gtttacgtct ctctcctgcc gggcataact ttttacgcta tagccaacaa
0211 attctcgcgt tagtggatga agcgcggagc gttgtcgctg gcgatgagcc gcaaggttta ttttctcttg
0281 gttcgctgga aagcaccgct gcagtgcgca ttccagccac gctggcggaa ttcaaccgtc gttatcccaa
0351 aattcagttt tcactttcca ccggcccttc cggcactatg ctggatggtg tactggaggg aaaactgaat
0421 gcggcgttta ttgatggacc cattaaccat actgccatcg acgggatacc ggtataccgc gaggaactga
0491 tgatcgtcac gccacaagga tatgcgccag taacccgtgc cagtcaggtt aatggcagta acatttatgc
0561 cttccgcgcc aattgttcgt atcgtcgcca cttcgagagc tggtttcatg ctgacggtgc cgctccggga
0631 actatccatg agatggagtc ttatcacgga atgttggcct gtgtgatcgc aggagcaggc attgcgctta
0701 ttccgcgctc tatgctggaa agtatgccgg ggcatcacca ggttgaagcg tggccgttag ctgagcaatg
0771 gcgttggtta acaacctggc tggtctggcg tcgtggtgcg aaaacacgtc cgctcgaggc atttattcaa
0841 ctgctggatg tgcctgactc ggcaagacag ggatatcaat gaGCTATTTT TGATAGTTCT TGCGGTTAAT
0911 ATGCTCTATA TAGTGATGTT CCGATGACTT ATGACTATAT GGGGCAAATA TGGTTACGCC AGTAAGCATC
0981 AG
|
