MG1655
W3110
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Top Genes Deletions Circular Linear Motif BLAST SequenceCutter Download Strains
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Total Hit : 2607 | First   Previous  1-50    51-100   101-150   151-200   201-250   251-300   301-350   Next   Last
Symbol
1-cysPrx_C ahpC 
1   
 PF10417.4  Finn RD, Coggill PC  C-terminal domain of 1-Cys peroxiredoxin 
2-Hacid_dh ldhA, pdxB, serA, tiaE 
4   
 PF00389.25  Finn RD, Griffiths-Jones SR  D-isomer specific 2-hydroxyacid dehydr.. 
2-Hacid_dh_C ldhA, pdxB, serA, tiaE, ycdW 
5   
 PF02826.14  Finn RD, Griffiths-Jones SR  D-isomer specific 2-hydroxyacid dehydr.. 
2-oxoacid_dh aceF, sucB 
2   
 PF00198.18  Bateman A, Finn RD, Griffiths-Jones SR  2-oxoacid dehydrogenases acyltransfera.. 
2Fe-2S_thioredx nuoE 
1   
 PF01257.14  Finn RD, Bateman A  Thioredoxin-like [2Fe-2S] ferredoxin 
2OG-FeII_Oxy_2 alkB 
1   
 PF13532.1  Bateman A  2OG-Fe(II) oxygenase superfamily 
2OG-FeII_Oxy_3 ybiX 
1   
 PF13640.1  Bateman A  2OG-Fe(II) oxygenase superfamily 
3-alpha yiiM 
1   
 PF03475.9  Aravind L, Anantharaman V  3-alpha domain 
3-dmu-9_3-mt phnB 
1   
 PF06983.8  Vella Briffa B  3-demethylubiquinone-9 3-methyltransfe.. 
3D mltA 
1   
 PF06725.6  Bateman A  3D domain 
3HCDH fadB, paaH, yfcX 
6   
 PF00725.17  Bateman A, Griffiths-Jones SR  3-hydroxyacyl-CoA dehydrogenase, C-ter.. 
3HCDH_N fadB, paaH, yfcX 
3   
 PF02737.13  Bateman A, Griffiths-Jones SR  3-hydroxyacyl-CoA dehydrogenase, NAD b.. 
4HBT paaI, ybdB, ybgC, yciA, ydiI, yigI 
6   
 PF03061.17  Bateman A  Thioesterase superfamily 
4HBT_2 ybaW 
1   
 PF13279.1  Bateman A  Thioesterase-like superfamily 
5-FTHF_cyc-lig ygfA 
1   
 PF01812.15  Bashton M, Bateman A  5-formyltetrahydrofolate cyclo-ligase .. 
5TM-5TMR_LYT yehU, ypdA 
2   
 PF07694.7  Anantharaman V, Aravind L, Studholme DJ  5TMR of 5TMR-LYT 
5_3_exonuc exo, polA 
2   
 PF01367.15  Bateman A, Griffiths-Jones SR  5'-3' exonuclease, C-terminal SAM fold 
5_3_exonuc_N exo, polA 
2   
 PF02739.11  Bateman A, Griffiths-Jones SR  5'-3' exonuclease, N-terminal resolvas.. 
5_nucleotid_C cpdB, ushA 
2   
 PF02872.13  Bateman A, Griffiths-Jones SR  5'-nucleotidase, C-terminal domain 
60KD_IMP yidC 
1   
 PF02096.15  Mian N, Bateman A  60Kd inner membrane protein 
6PGD gnd 
1   
 PF00393.14  Finn RD, Griffiths-Jones SR  6-phosphogluconate dehydrogenase, C-te.. 
A2M yfhM 
1   
 PF00207.17  Finn RD, Sammut SJ  Alpha-2-macroglobulin family 
A2M_N yfhM 
1   
 PF01835.14  Bateman A  MG2 domain 
A2M_N_2 yfhM 
1   
 PF07703.9  Studholme DJ  Alpha-2-macroglobulin family N-termina.. 
AAA clpA, clpB, ftsH, hslU, lon, ycaJ 
6   
 PF00004.24  Sonnhammer ELL  ATPase family associated with various .. 
AAA_12 yjhR 
1   
 PF13087.1  Bateman A  AAA domain 
AAA_18 phnN 
1   
 PF13238.1  Bateman A  AAA domain 
AAA_2 clpA, clpB, clpX, hslU 
4   
 PF07724.9  Studholme DJ  AAA domain (Cdc48 subfamily) 
AAA_22 gspA 
1   
 PF13401.1  Bateman A  AAA domain 
AAA_23 sbcC 
1   
 PF13476.1  Bateman A  AAA domain 
AAA_25 radA 
1   
 PF13481.1  Bateman A  AAA domain 
AAA_26 bioD, pta, ynfK 
3   
 PF13500.1  Bateman A  AAA domain 
AAA_28 nadR 
1   
 PF13521.1  Bateman A  AAA domain 
AAA_30 recD 
1   
 PF13604.1  Coggill P  AAA domain 
AAA_31 mrp, wzc, yccC 
3   
 PF13614.1  Bateman A  AAA domain 
AAA_32 ycbZ 
1   
 PF13654.1  Coggill P  AAA domain 
AAA_5 mcrB, yehL, yieN 
3   
 PF07728.9  Studholme DJ  AAA domain (dynein-related subfamily) 
AAA_PrkA yeaG 
1   
 PF08298.6  Vella Briffa B, Bateman A  PrkA AAA domain 
AA_kinase argA, argB, lysC, metL, proB, pyrH, thrA, yahI, ybcF, yqeA 
10   
 PF00696.23  Bateman A, Birney E, Griffiths-Jones SR  Amino acid kinase family 
AA_permease ansP, aroP, cycA, gabP, lysP, mmuP, pheP, proY, puuP, yeeF, yifK 
11   
 PF00324.16  Finn RD, Bateman A  Amino acid permease 
AA_permease_2 adiC, cadB, frlA, gadC, potE, ybaT, ycaM, ydgI, ygjI, yjeH, yjeM 
11   
 PF13520.1  Bateman A  Amino acid permease 
ABC-3 znuB 
1   
 PF00950.12  Bateman A  ABC 3 transport family 
ABC1 ubiB 
1   
 PF03109.11  Bateman A  ABC1 family 
ABC2_membrane yadH 
1   
 PF01061.19  Finn RD, Bateman A  ABC-2 type transporter 
ABC2_membrane_3 rbbA, ybhR, ybhS, yhhJ 
4   
 PF12698.2  Bateman A  ABC-2 family transporter protein 
ABC_membrane cydC, cydD, mdlA, mdlB, msbA 
5   
 PF00664.18  Bateman A  ABC transporter transmembrane region 
ABC_membrane_2 yddA 
1   
 PF06472.10  Yeats C  ABC transporter transmembrane region 2 
ABC_tran afuC, alsA, araG, artP, btuD, ccmA, cydC, cydD, cysA, ddpD, ddpF, dppD, dppF, ego, fecE, fepC, fhuC, ftsE, glnQ, gltL, hisP, livF, livG, lolD, macB, malK, mdlA, mdlB, metN, mglA, modC, modF, msbA, nikD, nikE, oppD, oppF, phnC, phnK, phnL, potA, potG, proV, pstB, rbbA, rbsA, sapD, sapF, ssuB, sufC, tauB, thiQ, ugpC, uup, uvrA, xylG, yadG, ybbA, ybbL, ybhF, ybiT, ycjV, ydcT, yddA, yecC, yehX, yejF, yhbG, yhdZ, yheS, yjjK, yliA, ynjD, yojI, yphE, yrbF, ytfR, znuC 
95   
 PF00005.22  Sonnhammer ELL, Bateman A  ABC transporter 
ABC_tran_2 uup, ybiT, yheS, yjjK 
4   
 PF12848.2  Mistry J  ABC transporter 
ABG_transport abgT 
1   
 PF03806.8  TIGRFAMs, Griffiths-Jones SR  AbgT putative transporter family 
Total Hit : 2607 | First   Previous  1-50    51-100   101-150   151-200   201-250   251-300   301-350   Next   Last