|
|
Symbol |
|
|
|
|
|
S-AdoMet_synt_C
|
metK |
1 |
PF02773.11 |
Finn RD, Griffiths-Jones SR |
S-adenosylmethionine synthetase, C-ter.. |
|
S-AdoMet_synt_M
|
metK |
1 |
PF02772.11 |
Finn RD, Griffiths-Jones SR |
S-adenosylmethionine synthetase, centr.. |
|
S-AdoMet_synt_N
|
metK |
1 |
PF00438.15 |
Finn RD, Griffiths-Jones SR |
S-adenosylmethionine synthetase, N-ter.. |
|
S-methyl_trans
|
metH, mmuM |
2 |
PF02574.11 |
Bashton M, Bateman A |
Homocysteine S-methyltransferase |
|
S1
|
nusA, pnp, rnb, rne, rng, rnr, rpsA, yhgF |
13 |
PF00575.18 |
Bateman A |
S1 RNA binding domain |
|
S4
|
hslR, rluB, rluC, rluD, rpsD, rsuA, tyrS, yjbC |
8 |
PF01479.20 |
Bateman A |
S4 domain |
|
S4_2
|
ybcJ |
1 |
PF13275.1 |
Bateman A |
S4 domain |
|
SAF
|
garD, uxaA |
2 |
PF08666.7 |
Bateman A, Lakshminarayan I |
SAF domain |
|
SAF_2
|
flgA |
1 |
PF13144.1 |
Coggill P |
SAF-like |
|
SAICAR_synt
|
purC |
1 |
PF01259.13 |
Finn RD, Bateman A |
SAICAR synthetase |
|
SAM_MT
|
yhiQ |
1 |
PF04445.8 |
Kerrison ND |
Putative SAM-dependent methyltransferase |
|
SATase_N
|
cysE |
1 |
PF06426.9 |
Wilbrey A, Studholme DJ |
Serine acetyltransferase, N-terminal |
|
SbcCD_C
|
mukB, sbcC |
2 |
PF13558.1 |
Coggill P |
Putative exonuclease SbcCD, C subunit |
|
SbcD_C
|
sbcD |
1 |
PF12320.3 |
Assefa S, Gavin OL, Bateman A |
Type 5 capsule protein repressor C-ter.. |
|
SbmA_BacA
|
sbmA |
1 |
PF05992.7 |
Finn RD |
SbmA/BacA-like family |
|
SBP_bac_1
|
malE, ycjN |
2 |
PF01547.20 |
Bateman A, Griffiths-Jones SR |
Bacterial extracellular solute-binding.. |
|
SBP_bac_11
|
cysP, modA, sbp |
3 |
PF13531.1 |
Coggill P |
Bacterial extracellular solute-binding.. |
|
SBP_bac_3
|
argT, artI, artJ, evgS, fliY, glnH, gltI, hisJ, yfhD, yhdW |
11 |
PF00497.15 |
Finn RD |
Bacterial extracellular solute-binding.. |
|
SBP_bac_5
|
ddpA, dppA, mppA, nikA, oppA, sapA, sgrR, ybaE, yejA, ygiS, yliB |
11 |
PF00496.17 |
Finn RD, Yeats C |
Bacterial extracellular solute-binding.. |
|
SBP_bac_6
|
tbpA |
1 |
PF13343.1 |
Bateman A |
Bacterial extracellular solute-binding.. |
|
SBP_bac_7
|
yiaO |
1 |
PF03480.8 |
Bateman A |
Bacterial extracellular solute-binding.. |
|
SBP_bac_8
|
potD, potF, ugpB, ydcS, ynjB |
5 |
PF13416.1 |
Bateman A |
Bacterial extracellular solute-binding.. |
|
ScdA_N
|
ytfE |
1 |
PF04405.9 |
Yeats C |
Domain of Unknown function (DUF542) |
|
SCFA_trans
|
atoE |
1 |
PF02667.9 |
Bashton M, Bateman A |
Short chain fatty acid transporter |
|
SCP2
|
yhbT, yigP |
2 |
PF02036.12 |
Bateman A |
SCP-2 sterol transfer family |
|
SDF
|
dctA, gltP, sstT, ydjN |
4 |
PF00375.13 |
Finn RD |
Sodium:dicarboxylate symporter family |
|
Sdh5
|
ygfY |
1 |
PF03937.11 |
Bateman A, Yeats C, McNeil M, Eberhardt R |
Flavinator of succinate dehydrogenase |
|
SDH_alpha
|
sdaA, sdaB, tdcG, yhaM |
4 |
PF03313.10 |
Bateman A |
Serine dehydratase alpha chain |
|
SDH_beta
|
sdaA, sdaB, tdcG |
3 |
PF03315.10 |
Bateman A |
Serine dehydratase beta chain |
|
Sdh_cyt
|
sdhC, sdhD |
2 |
PF01127.17 |
Finn RD, Bateman A, Griffiths-Jones SR |
Succinate dehydrogenase/Fumarate reduc.. |
|
SdiA-regulated
|
yjiK |
1 |
PF06977.6 |
Vella Briffa B |
SdiA-regulated |
|
Se-cys_synth_N
|
selA |
1 |
PF12390.3 |
Gavin OL |
Selenocysteine synthase N terminal |
|
SEC-C
|
secA, ychJ, yecA |
4 |
PF02810.10 |
Aravind L |
SEC-C motif |
|
SecA_DEAD
|
secA |
1 |
PF07517.9 |
Finn RD |
SecA DEAD-like domain |
|
SecA_PP_bind
|
secA |
1 |
PF01043.15 |
Finn RD |
SecA preprotein cross-linking domain |
|
SecA_SW
|
secA |
1 |
PF07516.8 |
Finn RD, Bateman A |
SecA Wing and Scaffold domain |
|
SecB
|
secB |
1 |
PF02556.9 |
Bashton M, Bateman A |
Preprotein translocase subunit SecB |
|
SecD-TM1
|
secD, yqjB |
2 |
PF13721.1 |
Coggill P |
SecD export protein N-terminal TM region |
|
SecD_SecF
|
secD, secF |
2 |
PF02355.11 |
Bashton M, Bateman A |
Protein export membrane protein |
|
SecE
|
secE |
1 |
PF00584.15 |
Birney E |
SecE/Sec61-gamma subunits of protein t.. |
|
SecG
|
secG |
1 |
PF03840.9 |
TIGRFAMs, Griffiths-Jones SR |
Preprotein translocase SecG subunit |
|
SecM
|
secM |
1 |
PF06558.7 |
Moxon SJ |
Secretion monitor precursor protein (S.. |
|
Secretin
|
gspD, hofQ |
2 |
PF00263.16 |
Finn RD |
Bacterial type II and III secretion sy.. |
|
Secretin_N
|
gspD, hofQ |
4 |
PF03958.12 |
Yeats C |
Bacterial type II/III secretion system.. |
|
SecY
|
secY |
1 |
PF00344.15 |
Finn RD |
SecY translocase |
|
Sec_GG
|
secD, secF |
2 |
PF07549.9 |
Yeats C |
SecD/SecF GG Motif |
|
Sel1
|
ybeQ, ybeT, yjcO |
15 |
PF08238.7 |
Bateman A |
Sel1 repeat |
|
SelA
|
selA |
1 |
PF03841.8 |
TIGRFAMs, Griffiths-Jones SR |
L-seryl-tRNA selenium transferase |
|
SelB-wing_2
|
selB |
1 |
PF09106.6 |
Sammut SJ |
Elongation factor SelB, winged helix |
|
SelB-wing_3
|
selB |
1 |
PF09107.6 |
Sammut SJ |
Elongation factor SelB, winged helix |
Total Hit : 
