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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
yncK
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Related strains
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Strains Search
|
Search strains by gene name:
yncK
Search strains by all related name:
yncK b4530 b4531 b4578 ECK1425 insP JW5227 JW5961 orf1 orfA tnpA
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General information (Go to Linear View: )
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Gene Name
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yncK
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Alternative name
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b4530,b4531,b4578,ECK1425,insP,JW5227,JW5961,orf1,orfA,tnpA
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Location, Length
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1,504,857 - 1,505,363
(
-
)
;
32.39
min
;
507
(bp) ,
168
(aa)
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Product
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Note
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ECK1425:JW5227+JW5961:b4578; predicted transposase
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Function
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PID
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
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(
)
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- Protein name
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- Synonyms
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- Gene name
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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PSI-BLAST
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nr
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BLAST
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transposase, IS605 family [Escherichia coli 53638]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 aacgaaacga catgcgcctg cgaagcgcct
-070 catttcacac tcctgttgac caccgggtct taactggaat ttaaatgcct gtaatcgttt cacaggtcaa
0001 atgatacttt ggtctgtgaa aaaagaaacc gatatccggc gtggaaggca ttgtgttttc ctgatgcatg
0071 ttcacctgct ctttgtcacc agataccgac gccagatttt tgaccatgac gcgacagaaa aactacgcac
0141 ttacttttca aatgtatgtg ctgattttga agctgaactg gttgaaatgg atggcgaacc agatcacgtc
0211 catttgttaa ttaactatcc tcccaaactg gcgatatcca gtctggtaaa cagcctcaaa ggcgtatcgg
0281 gtaggtgact gcgacgagat cgaccagata ttgcattcag gtattactac aaaggcgttt tgtggagtcc
0351 tggctatttt gccagtagct gcggaggtgc gccaatatcc gtcatccgcc aatacattga acaacagcaa
0421 acacctggtc aggtggaaaa ccgcgcctta tatccccgcc ctgaaggatg gggttttacg gcgcaccgga
0491 taaaaagcgc catctaacga tggcgcgtct ggaactactt tttgttaacg tcaaacatgg tggcatcggt
0561 cgccatgtca tcaataactt gtttaatatt ttcgaaagcc attggcg
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