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PEC Original Annotations
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Essentiality
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Class
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non-essential
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|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
ynbC
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ynbC
Search strains by all related name:
ynbC b1410 ECK1403 JW1407
|
General information (Go to Linear View: )
|
|
Gene Name
|
ynbC
|
|
Alternative name
|
b1410,ECK1403,JW1407
|
|
Location, Length
|
1,480,852 - 1,482,609
(
+
)
;
31.87
min
;
1758
(bp) ,
585
(aa)
|
|
Product
|
predicted hydrolase
|
|
Note
|
ECK1403:JW1407:b1410
|
|
Function
|
|
|
PID
|
85674950
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YNBC_ECOLI
(
P76092
;
Q2MBC5
)
|
|
- Protein name
|
RecName: Full=Uncharacterized protein ynbC;
|
|
- Synonyms
|
|
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- Gene name
|
Name=ynbC; OrderedLocusNames=b1410, JW1407;
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Homology Analysis
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BLAST
|
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Bacteria
|
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GTOP
|
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PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
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PSI-BLAST
|
|
|
nr
|
|
BLAST
|
predicted hydrolase [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MENSRIPGEH FFTTSDNTAL FYRHWPALQP GAKKVIVLFH RGHEHSGRLQ HLVDELAMPD TAFYAWDARG
0071 HGKSSGPRGY SPSLARSVRD VDEFVRFAAS DSQVGLEEVV VIAQSVGAVL VATWIHDYAP AIRGLVLASP
0141 AFKVKLYVPL ARPALALWHR LRGLFFINSY VKGRYLTHDR QRGASFNNDP LITRAIAVNI LLDLYKTSER
0211 IIRDAAAITL PTQLLISGDD YVVHRQPQID FYQRLRSPLK ELHLLPGFYH DTLGEENRAL AFEKMQSFIS
0281 RLYANKSQKF DYQHEDCTGP SADRWRLLSG GPVPLSPVDL AYRFMRKAMK LFGTHSSGLH LGMSTGFDSG
0351 SSLDYVYQNQ PQGSNAFGRL VDKIYLNSVG WRGIRQRKTH LQILIKQAVA DLHAKGLAVR VVDIAAGHGR
0421 YVLDALANEP AVSDILLRDY SELNVAQGQE MIAQRGMSGR VRFEQGDAFN PEELSALTPR PTLAIVSGLY
0491 ELFPENEQVK NSLAGLANAI EPGGILIYTG QPWHPQLEMI AGVLTSHKDG KPWVMRVRSQ GEMDSLVRDA
0561 GFDKCTQRID EWGIFTVSMA VRRDN
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ACATGGCGGA CTCCTTGACA GGATTGACTC
-070 ATTAATTTTC ACCGCTCCGG TATTTTTTTA TTTTATACGC TACTGCTGTT ACTGAAGGAA AATAGAGAAA
0001 atggaaaatt cacgcatccc tggggaacat ttttttacca ccagtgataa tacagcgttg ttttatcggc
0071 actggcccgc tttacagccc ggggcgaaaa aggtcatcgt cttatttcat cgcgggcatg aacattctgg
0141 tcgtctacaa catctcgttg atgaactggc gatgccagat actgcttttt atgcctggga tgcccgaggg
0211 catggaaaaa gttcggggcc gcgtggttat agcccatctc ttgcgcgttc agtgcgggat gtcgatgaat
0281 ttgtccgttt tgctgccagc gacagccagg ttggactgga agaggtggta gtgatcgcgc aaagcgtcgg
0351 cgcagtgctg gttgccacat ggattcatga ttatgcacct gcaattcgcg ggctggtgct ggcttctccg
0421 gcctttaagg ttaaattgta tgtgccgctg gcacgtcctg cgctggcgtt atggcatcgt ctgcgtggtc
0491 tgttttttat taattcctat gtgaaaggac gctatttgac ccacgatcgg caacgggggg cgagtttcaa
0561 taatgatccg ctgatcacac gggcgattgc cgttaatatc ttgctcgatc tctacaaaac gtctgaacgt
0631 attattagag atgcggcggc gattacgctc cccacgcaac ttctgatatc aggcgatgac tatgtggtgc
0701 atcgccaacc gcagattgat ttttatcaga gattacgtag ccctctgaaa gagctgcatc tgctgccagg
0771 cttttatcac gacacgttgg gtgaagagaa cagggcgctg gcatttgaaa aaatgcaaag ctttattagt
0841 cgtttatatg ctaacaaatc gcaaaaattt gattatcagc atgaagactg cacaggacca tcagcggatc
0911 gatggcggct actttctggt ggacccgtgc cattatcgcc ggttgattta gcgtatcgct ttatgcgaaa
0981 ggcgatgaaa ttgttcggga cgcactcttc gggcctgcat ctcggaatga gcaccggctt tgattcaggc
1051 agttcgctgg attatgtcta tcaaaatcaa ccgcaaggta gtaacgcatt cgggcgttta gtcgacaaaa
1121 tctacctgaa cagtgttggc tggcgcggta ttcgccagcg caaaacccat ttacaaatac tgattaaaca
1191 agccgttgcc gatctccacg ccaaaggttt agccgtccgc gtggttgaca ttgccgcagg gcatgggcgc
1261 tatgtactgg atgcgctggc aaacgagcct gccgtaagcg atattttgtt acgtgattac agcgagttaa
1331 atgttgcaca ggggcaagag atgattgctc aacggggaat gtctgggcgg gtgcgttttg aacagggcga
1401 tgcgtttaac ccggaggaac tcagcgcgtt aactccgcgg cctacgctgg cgattgtctc tggcctgtat
1471 gagctttttc ccgaaaatga gcaggtaaaa aactcactcg caggtcttgc caatgccatc gaaccgggcg
1541 gcattctcat ctacaccggg cagccgtggc accctcaact ggagatgatt gccggggtgt taaccagtca
1611 taaagatggt aaaccgtggg taatgcgcgt gcgttcgcaa ggggagatgg attcactcgt gcgtgatgcc
1681 ggatttgata aatgcacaca acggattgat gagtggggta tttttacggt ttcgatggcg gtgcgtcgtg
1751 ataactgaAC GTCGGAACGT ATTGCTACAA GGCGCTGGCT GGTTATTGTT GCTGGCCCCG TTTTTCTTCT
1821 TCACCTATGG ATCTCTTAAT CAGTTCACCG CGGTTCAG
|
