|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yfdE
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yfdE
Search strains by all related name:
yfdE b2371 ECK2367 JW2368
|
General information (Go to Linear View: )
|
|
Gene Name
|
yfdE
|
|
Alternative name
|
b2371,ECK2367,JW2368
|
|
Location, Length
|
2,493,469 - 2,494,614
(
-
)
;
53.67
min
;
1146
(bp) ,
381
(aa)
|
|
Product
|
predicted CoA-transferase, NAD(P)-binding
|
|
Note
|
ECK2367:JW2368:b2371
|
|
Function
|
|
|
PID
|
1799782
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YFDE_ECOLI
(
P76518
;
P76946
)
|
|
- Protein name
|
RecName: Full=Uncharacterized protein yfdE;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yfdE; OrderedLocusNames=b2371, JW2368;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
RecName: Full=Uncharacterized protein yfdE
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
predicted CoA-transferase, NAD
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MTNNESKGPF EGLLVIDMTH VLNGPFGTQL LCNMGARVIK VEPPGHGDDT RTFGPYVDGQ SLYYSFINHG
0071 KESVVLDLKN DHDKSIFINM LKQADVLAEN FRPGTMEKLG FSWETLQEIN PRLIYASSSG FGHTGPLKDA
0141 PAYDTIIQAM SGIMMETGYP DAPPVRVGTS LADLCGGVYL FSGIVSALYG REKSQRGAHV DIAMFDATLS
0211 FLEHGLMAYI ATGKSPQRLG NRHPYMAPFD VFNTQDKPIT ICCGNDKLFS ALCQALELTE LVNDPRFSSN
0281 ILRVQNQAIL KQYIERTLKT QAAEVWLARI HEVGVPVAPL LSVAEAIKLP QTQARNMLIE AGGIMMPGNP
0351 IKISGCADPH VMPGAATLDQ HGEQIRQEFS S
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 atttatgtca gtcgactggt ttcataatta
-070 atcatgttat tgattttaca taaatgccga agtgtctttt caccttcggc ttttttcaag gcataagcaa
0001 atgacaaata atgaaagcaa agggccgttt gaaggcttat tagttatcga tatgacacat gtccttaatg
0071 gacctttcgg aactcaactt ctttgtaata tgggcgcaag ggtaattaaa gttgagccgc cgggtcatgg
0141 tgatgatacc cgcacatttg gtccctatgt ggatggacag tcactctatt acagttttat taatcatggc
0211 aaagagagtg tggttcttga tttaaagaat gatcacgata aaagtatatt tataaatatg ctcaaacaag
0281 ctgatgtatt agctgagaat tttcgcccag gtacaatgga aaaactgggg ttttcatggg aaacgcttca
0351 agaaatcaac ccgcgcctca tatatgcttc atcgtcaggt ttcggacata ccggtccgct aaaagatgct
0421 cctgcctacg ataccatcat tcaggcaatg agcgggataa tgatggaaac aggatatcct gatgctccgc
0491 cagtgcgcgt tggtacatct cttgcggatc tatgcggcgg tgtctattta ttcagcggaa tagtgagtgc
0561 actttatggc cgcgaaaaga gccagagagg ggcgcatgtc gatatagcga tgtttgatgc cacgctgagt
0631 tttctggagc atggtctgat ggcatatatc gcaactggga agtcaccaca acgtctggga aatcgccatc
0701 cctacatggc accttttgat gttttcaata ctcaggataa gccgattacg atttgttgtg gtaatgacaa
0771 gcttttttct gcgttatgcc aggcactgga gcttacggaa ctggttaatg atccccgatt tagcagcaat
0841 attttacgcg tacaaaacca ggctattctt aaacaatata ttgagcggac gttaaaaacg caggcagctg
0911 aagtttggtt agccagaata catgaagttg gtgtacccgt cgcgccgtta ttaagtgtgg ctgaggccat
0981 taaattgcca caaactcagg cgagaaatat gttgattgaa gccgggggaa taatgatgcc gggtaatccg
1051 ataaaaatca gcggctgcgc ggacccgcat gttatgccgg gagcggcaac gctcgaccag catggggaac
1121 aaattcgcca ggagttctca tcataaatgt aagatgtgct ggtaaatagc tcccacattt gaacattgtg
1191 ggagccgcta tttagtcatt tttctgacag aaaacagcaa tctcctggtc cagctc
|
