|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yedF
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yedF
Search strains by all related name:
yedF b1930 ECK1929 JW1915
|
General information (Go to Linear View: )
|
|
Gene Name
|
yedF
|
|
Alternative name
|
b1930,ECK1929,JW1915
|
|
Location, Length
|
2,011,616 - 2,011,849
(
+
)
;
43.29
min
;
234
(bp) ,
77
(aa)
|
|
Product
|
conserved hypothetical protein
|
|
Note
|
ECK1929:JW1915:b1930
|
|
Function
|
|
|
PID
|
1736598
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YEDF_ECOLI
(
P0AA31
;
P31065
)
|
|
- Protein name
|
RecName: Full=UPF0033 protein yedF;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yedF; OrderedLocusNames=b1930, JW1915;
|
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
hypothetical protein Z3020 [Escherichia coli O157:H7 EDL933]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MKNIVPDYRL DMVGEPCPYP AVATLEAMPQ LKKGEILEVV SDCPQSINNI PLDARNHGYT VLDIQQDGPT
0071 IRYLIQK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TGGTGACATA TTTGCTGTTG TTTGCTGCGC
-070 TGATGTTGAT TATCGGCTGG GAAAAACGCT TCTTCCGCCG TGCGGCACCG CAGACTGCTA AGGAGATCGC
0001 atgaaaaata tcgttcctga ttaccgcctt gatatggtgg gtgaaccctg cccttatccg gcagtcgcaa
0071 cccttgaggc gatgccgcag ttaaaaaaag gggaaatcct ggaagtggtg agcgactgtc cgcagtcgat
0141 caataatatt ccactggatg cgcgtaatca cggctatacg gtgctggata ttcagcaaga cgggccgacc
0211 attcgttatt taattcagaa gtaaTCCCTC ATTCCCGCTG TGACCCACAG CGGGAACATC GTTACCTTTG
0281 TATCACATAG ATTTTACCCG CCCCCACTCC TATTCTTTTC AGTATGATCT CAGG
|
