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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
ycgV
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Related strains
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Strains Search
|
Search strains by gene name:
ycgV
Search strains by all related name:
ycgV b1202 ECK1190 JW1193
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General information (Go to Linear View: )
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Gene Name
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ycgV
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Alternative name
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b1202,ECK1190,JW1193
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Location, Length
|
1,254,662 - 1,257,529
(
-
)
;
27.00
min
;
2868
(bp) ,
955
(aa)
|
|
Product
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predicted adhesin
|
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Note
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ECK1190:JW1193:b1202
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Function
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PID
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85674876
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
|
YCGV_ECOLI
(
P76017
;
Q9R7N1; Q9R7N2
)
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- Protein name
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RecName: Full=Uncharacterized protein ycgV;
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- Synonyms
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- Gene name
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Name=ycgV; OrderedLocusNames=b1202, JW1193;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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RecName: Full=Uncharacterized protein ycgV
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PSI-BLAST
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nr
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BLAST
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predicted adhesin [Escherichia coli str. K-12 substr. MG1655]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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| Sequences |
Amino acid
FASTA format
|
0001 MGIKQHNGNT KADRLAELKI RSPSIQLIKF GAIGLNAIIF SPLLIAADTG SQYGTNITIN DGDRITGDTA
0071 DPSGNLYGVM TPAGNTPGNI NLGNDVTVNV NDASGYAKGI IIQGKNSSLT ANRLTVDVVG QTSAIGINLI
0141 GDYTHADLGT GSTIKSNDDG IIIGHSSTLT ATQFTIENSN GIGLTINDYG TSVDLGSGSK ITTDGSTGVY
0211 IGGLNGNNAN GAARFTATDL TIDVQGYSAM GINVQKNSVV DLGTNSTIKT NGDNAHGLWS FGQVSANALT
0281 VDVTGAAANG VEVRGGTTTI GADSHISSAQ GGGLVTSGSD AIINFTGTAA QRNSIFSGGS YGASAQTATA
0351 VVNMQNTDIT VDRNGSLALG LWALSGGRIT GDSLAITGAA GARGIYAMTN SQIDLTSDLV IDMSTPDQMA
0421 IATQHDDGYA ASRINASGRM LINGSVLSKG GLINLDMHPG SVWTGSSLSD NVNGGKLDVA MNNSVWNVTS
0491 NSNLDTLALS HSTVDFASHG STAGTFATLN VENLSGNSTF IMRADVVGEG NGVNNKGDLL NISGSSAGNH
0561 VLAIRNQGSE ATTGNEVLTV VKTTDGAASF SASSQVELGG YLYDVRKNGT NWELYASGTV PEPTPNPEPT
0631 PAPAQPPIVN PDPTPEPAPT PKPTTTADAG GNYLNVGYLL NYVENRTLMQ RMGDLRNQSK DGNIWLRSYG
0701 GSLDSFASGK LSGFDMGYSG IQFGGDKRLS DVMPLYVGLY IGSTHASPDY SGGDGTARSD YMGMYASYMA
0771 QNGFYSDLVI KASRQKNSFH VLDSQNNGVN ANGTANGMSI SLEAGQRFNL SPTGYGFYIE PQTQLTYSHQ
0841 NEMTMKASNG LNIHLNHYES LLGRASMILG YDITAGNSQL NVYVKTGAIR EFSGDTEYLL NNSREKYSFK
0911 GNGWNNGVGV SAQYNKQHTF YLEADYTQGN LFDQKQVNGG YRFSF
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 caccatacaa atatcatgat gataagagga
-070 tattattcat tgatttaaac aaaatgacaa aatccataga cccatagtct gggtactata taggagtggt
0001 atgggcatca aacaacacaa tgggaatacc aaagcagatc gtctcgctga attaaaaatc cgttcgccct
0071 caattcaact gataaaattt ggcgctattg gtttgaatgc aattatcttt tcccccctgc tgatagctgc
0141 tgatacagga agtcaatatg gcaccaatat tactattaat gatggtgaca gaattacagg agataccgcc
0211 gatccatcag gaaacctcta tggtgtaatg accccagcag gaaacacgcc tggcaatatc aacctgggta
0281 atgatgtcac cgtcaatgtc aacgacgcct ctggatatgc aaaaggaatc attattcagg gcaaaaacag
0351 ctccctgaca gctaaccgac tcacagtaga tgttgttggt caaacctctg ccatcggcat taacttaatt
0421 ggtgactata cccatgctga cttaggcaca ggcagcacca ttaagagtaa cgatgacggc atcattattg
0491 ggcatagctc aacactaaca gccactcaat tcaccattga aaactcgaac ggtataggcc taaccatcaa
0561 tgactatggc accagtgtcg atcttggaag cggaagtaaa atcacgaccg atggaagtac aggtgtttat
0631 atcggtggtc tcaacggcaa taacgccaat ggtgctgcgc gttttacggc tacagacctg acaatcgatg
0701 ttcagggcta cagcgccatg gggataaacg tacagaaaaa ctctgttgtc gatctcggaa caaacagtac
0771 cattaaaacc aatggcgata atgctcacgg cctctggagc tttggccagg ttagcgcgaa tgcactcact
0841 gttgatgtaa ctggagccgc ggccaatggc gtcgaagttc gtggtggtac aaccactatc ggtgcagata
0911 gccatatttc ttccgcgcag ggcggtggcc tcgtcaccag tggttcagac gcgataatca attttactgg
0981 cacggcagcg caacgaaaca gcatcttttc cggcggttct tatggtgcct cggcccagac ggcaacggct
1051 gttgtcaaca tgcaaaatac cgatattaca gttgatcgta atggcagtct ggcgctgggt ttgtgggctc
1121 tcagcggcgg tagaataacc ggagacagtt tggctatcac cggcgcggca ggagccaggg gaatttatgc
1191 catgaccaac agccagatcg acctcacgag cgatctggtc attgatatga gtacacccga ccagatggcc
1261 atcgcaacgc aacatgacga tggttatgcc gccagccgca tcaacgcctc gggtcgtatg cttatcaacg
1331 gtagcgttct ttccaaaggt gggctaatca atctggatat gcaccctggg tcggtttgga caggttcctc
1401 cctcagcgat aatgtcaatg gcggaaaact ggacgttgca atgaataaca gcgtctggaa cgtaacaagt
1471 aattctaatc tcgacacgct ggcgctgagc cattcaactg tcgattttgc cagccacggg tcaactgccg
1541 gcacatttgc cacattaaac gtagagaacc tgagcggtaa cagtaccttt attatgcgtg ctgatgttgt
1611 tggcgagggt aatggcgtta ataataaagg ggatttattg aatatcagcg ggagtagtgc tggtaatcac
1681 gtattggcta tccgcaacca gggcagcgag gccacaacgg gaaatgaagt tctgacagtg gtaaaaacca
1751 ctgacggcgc ggcctcgttc agcgcgtctt ctcaggttga gttgggggga tatctgtacg atgtgcgtaa
1821 aaatggcact aactgggagc tttacgcttc cgggacagtt ccggaaccga ctcctaatcc tgaacccaca
1891 ccagctcccg ctcagcctcc catagtcaac cccgatccta cgcctgaacc cgctcccacg cctaaaccca
1961 ccacgaccgc agatgctggc ggcaattatc tcaatgtcgg ttacttattg aactatgttg aaaaccgtac
2031 gctgatgcaa cggatgggtg acctgcgaaa tcagagtaaa gacggtaata tctggttgcg cagttatggg
2101 ggaagcctgg actcctttgc cagtggcaaa ctgagcggct ttgacatggg ttacagcggt atccagtttg
2171 gtggggataa acgtctctct gatgtaatgc cgttgtatgt cggtctgtat attggctcaa cacatgcatc
2241 gccggactat agcggaggcg acggtaccgc acgttcagac tacatgggaa tgtacgccag ttacatggca
2311 caaaacggtt tttacagcga tctcgttata aaagcatcgc gccagaaaaa tagtttccac gtactggaca
2381 gtcagaacaa cggcgttaac gccaacggca ctgcgaatgg aatgagcatc tccctggaag ccgggcagag
2451 gttcaacctg tcccctactg gttatgggtt ctatatagag ccgcaaaccc agcttacata cagccaccag
2521 aatgagatga ctatgaaggc gagtaatggc ctcaatatac atctgaatca ctacgaatcg ctgctggggc
2591 gtgccagcat gatactgggg tatgacatca ccgcaggcaa cagccagctg aatgtctatg tgaagactgg
2661 cgctatccgc gagttttcag gggataccga atatctgttg aacaactccc gggagaagta cagtttcaaa
2731 ggtaatggct ggaataacgg cgtgggagtc agtgcacagt ataacaaaca gcacacattc tatctcgaag
2801 cggattacac gcagggtaac ctctttgatc agaagcaagt caacggagga tatcgcttca gcttttaagt
2871 gcgggataga caagccctta aacgatgctg aaaattgtta gcgtgcgccg gaatgaaata cagatcactc
2941 tgatgtatca gaaatcgttt ctgtcttt
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