|
PEC Original Annotations
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Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ycfP
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ycfP
Search strains by all related name:
ycfP b1108 ECK1094 JW5158
|
General information (Go to Linear View: )
|
|
Gene Name
|
ycfP
|
|
Alternative name
|
b1108,ECK1094,JW5158
|
|
Location, Length
|
1,166,720 - 1,167,262
(
+
)
;
25.11
min
;
543
(bp) ,
180
(aa)
|
|
Product
|
conserved hypothetical protein
|
|
Note
|
ECK1094:JW5158:b1108
|
|
Function
|
|
|
PID
|
85674838
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YCFP_ECOLI
(
P0A8E1
;
P75950
)
|
|
- Protein name
|
RecName: Full=UPF0227 protein ycfP;
|
|
- Synonyms
|
|
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- Gene name
|
Name=ycfP; OrderedLocusNames=b1108, JW5158;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
hypothetical protein ECs1486 [imported] - Escherichia coli
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MIIYLHGFDS NSPGNHEKVL QLQFIDPDVR LISYSTRHPK HDMQHLLKEV DKMLQLNVDE RPLICGVGLG
0071 GYWAERIGFL CDIRQVIFNP NLFPYENMEG KIDRPEEYAD IATKCVTNFR EKNRDRCLVI LSRNDEALNS
0141 QRTSEELHHY YEIVWDEEQT HKFKNISPHL QRIKAFKTLG
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TCGGCTCGCT GGAAAGCGAT CAGCACCCGT
-070 CTGAATCAGT TACATGAACG CTGGCAGGAA GAGAAAGCAG GTCACTAACC CTGGCTTATG TGAGGAAGCG
0001 atgattatct atttacacgg ttttgactct aacagtccgg gtaaccacga gaaagtctta caattgcagt
0071 ttattgaccc ggatgtacgc ttgataagct acagtacgcg gcatccgaaa catgatatgc agcatctgct
0141 taaagaagtg gacaaaatgt tgcaactgaa cgttgacgag cgtccgctaa tttgcggcgt tggcttgggc
0211 ggatactggg cggaacggat tggttttctt tgcgacatcc gccaggtgat cttcaaccct aatttgttcc
0281 cttatgagaa catggaaggc aagattgatc gcccggaaga gtatgccgat attgccacta agtgtgtgac
0351 caacttccgt gagaagaatc gcgatcgttg cctggtgatt ttgtcgcgta atgatgaagc gcttaacagc
0421 cagcggacat ctgaagagtt gcatcattat tacgagattg tctgggacga agagcagacg cacaaattca
0491 agaatatctc cccgcattta cagcgcatta aagcgttcaa aaccctcggg taaATGCCCT CGTCGCATCA
0561 GGTAACCTTG CCGGTACCTG ATGCGCTCCG AATTCTGTGG GTCGGATAAG GCGTCCACGC CGCATCCGAC
0631 AGTCGAGCAT CAA
|
