|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
ybeD
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ybeD
Search strains by all related name:
ybeD b0631 ECK0624 JW0626
|
General information (Go to Linear View: )
|
|
Gene Name
|
ybeD
|
|
Alternative name
|
b0631,ECK0624,JW0626
|
|
Location, Length
|
662,801 - 663,064
(
-
)
;
14.27
min
;
264
(bp) ,
87
(aa)
|
|
Product
|
conserved hypothetical protein
|
|
Note
|
ECK0624:JW0626:b0631
|
|
Function
|
|
|
PID
|
4062252
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YBED_ECOLI
(
P0A8J4
;
P30977
)
|
|
- Protein name
|
RecName: Full=UPF0250 protein ybeD;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=ybeD; OrderedLocusNames=b0631, JW0626;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
RecName: Full=UPF0250 protein ybeD
|
|
PSI-BLAST
|
RecName: Full=UPF0250 protein ybeD
|
|
nr
|
|
BLAST
|
hypothetical protein Z0776 [Escherichia coli O157:H7 EDL933]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MKTKLNELLE FPTPFTYKVM GQALPELVDQ VVEVVQRHAP GDYTPTVKPS SKGNYHSVSI TINATHIEQV
0071 ETLYEELGKI DIVRMVL
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 acttgaaagt gtaatttccg tccccatata
-070 ctaagcatca gtaaaaaact cccgccttct ggcgggagtt gctatttaat tacgttacgc cggagctgac
0001 atgaaaacca aacttaacga actgcttgaa ttccctactc cttttactta caaagttatg gggcaggcgt
0071 tacctgagct ggttgatcag gtggttgaag tggtacagcg ccatgcgcca ggtgactaca ccccaacggt
0141 aaaaccaagc agcaaaggca actaccactc ggtatctatc actatcaacg ccactcatat cgagcaggtt
0211 gaaacactgt atgaagaact gggcaaaatc gatattgtcc gcatggttct gtaactcgct tctccgttac
0281 ccggctcctg gtcgggtaac tcccctctcc tcgctgtgat atacttttcc cccactttta ctcattctcc
0351 acggagatgc cgtt
|
