|
PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
yaaA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yaaA
Search strains by all related name:
yaaA b0006 ECK0006 JW0005
|
General information (Go to Linear View: )
|
|
Gene Name
|
yaaA
|
|
Alternative name
|
b0006,ECK0006,JW0005
|
|
Location, Length
|
5,683 - 6,459
(
-
)
;
0.12
min
;
777
(bp) ,
258
(aa)
|
|
Product
|
conserved hypothetical protein
|
|
Note
|
ECK0006:JW0005:b0006
|
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Function
|
|
|
PID
|
21321897
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YAAA_ECOLI
(
P0A8I3
;
P11288
)
|
|
- Protein name
|
RecName: Full=UPF0246 protein yaaA;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=yaaA; OrderedLocusNames=b0006, JW0005;
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Homology Analysis
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BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
RecName: Full=UPF0246 protein yaaA
|
|
PSI-BLAST
|
RecName: Full=UPF0246 protein yaaA
|
|
nr
|
|
BLAST
|
conserved protein [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MLILISPAKT LDYQSPLTTT RYTLPELLDN SQQLIHEARK LTPPQISTLM RISDKLAGIN AARFHDWQPD
0071 FTPANARQAI LAFKGDVYTG LQAETFSEDD FDFAQQHLRM LSGLYGVLRP LDLMQPYRLE MGIRLENARG
0141 KDLYQFWGDI ITNKLNEALA AQGDNVVINL ASDEYFKSVK PKKLNAEIIK PVFLDEKNGK FKIISFYAKK
0211 ARGLMSRFII ENRLTKPEQL TGFNSEGYFF DEDSSSNGEL VFKRYEQR
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ggacgcgtgg gatgatgttt cgcaggagta
-070 atcacaacta tcgatcaact cattctcatt ttttgctaaa gtcggcataa atttcctgca aggactggat
0001 atgctgattc ttatttcacc tgcgaaaacg cttgattacc aaagcccgtt gaccaccacg cgctatacgc
0071 tgccggagct gttagacaat tcccagcagt tgatccatga ggcgcggaaa ctgacgcctc cgcagattag
0141 cacgctgatg cgcatcagcg acaaactggc gggtatcaac gccgctcgct ttcatgactg gcagccagat
0211 ttcacgccgg cgaatgcccg ccaggcgatt ctggcgttta aaggtgatgt ctacaccggc ttgcaggccg
0281 aaaccttcag cgaagacgat ttcgattttg cccaacagca tttgcgaatg ctttccggct tgtatggcgt
0351 actccgcccg ctcgatttaa tgcagcctta tcgtctggaa atggggatcc gtcttgagaa tgcccgaggg
0421 aaagatctgt atcaattctg gggagatatc atcaccaaca agctgaacga ggcgctcgca gcacaaggcg
0491 ataatgtggt gattaatctg gcgtcagatg agtattttaa atcggtgaag ccgaagaaat tgaatgccga
0561 gattatcaag ccggtgttcc tcgatgagaa gaacggcaaa tttaagatca tcagcttcta cgctaagaaa
0631 gcacgcggtc tgatgagtcg tttcattatt gaaaatcggc tgaccaaacc agagcaactg actggtttta
0701 atagcgaagg ttacttcttt gatgaagatt cctccagcaa tggcgaactg gtgtttaaac gctacgagca
0771 gcgttaagtt tgcagtcaat gccggatgcg gcgtgaacgc cttatcctgc ctacaaaagc atgcagattc
0841 aatatattgc agaattaacg taggcctgat aagacgc
|
