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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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J Bacteriol. 1993;175(17):5375-83.
Identification and characterization of the tktB gene encoding a second transketolase in Escherichia coli K-12.
Iida A, Teshiba S, Mizobuchi K.
(
8396116
)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
tktB
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Related strains
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Strains Search
|
Search strains by gene name:
tktB
Search strains by all related name:
tktB b2465 ECK2460 JW2449
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General information (Go to Linear View: )
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Gene Name
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tktB
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Alternative name
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b2465,ECK2460,JW2449
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Location, Length
|
2,578,292 - 2,580,295
(
+
)
;
55.49
min
;
2004
(bp) ,
667
(aa)
|
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Product
|
transketolase 2, thiamin-binding
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Note
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ECK2460:JW2449:b2465
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Function
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PID
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1799889
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
TKT2_ECOLI
(
P33570
)
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- Protein name
|
RecName: Full=Transketolase 2; Short=TK 2; EC=2.2.1.1;
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- Synonyms
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- Gene name
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Name=tktB; OrderedLocusNames=b2465, JW2449;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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PSI-BLAST
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nr
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BLAST
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transketolase 2, thiamin-binding [Escherichia coli str. K-12 substr. MG1655]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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| Sequences |
Amino acid
FASTA format
|
0001 MSRKDLANAI RALSMDAVQK ANSGHPGAPM GMADIAEVLW NDFLKHNPTD PTWYDRDRFI LSNGHASMLL
0071 YSLLHLTGYD LPLEELKNFR QLHSKTPGHP EIGYTPGVET TTGPLGQGLA NAVGLAIAER TLAAQFNQPD
0141 HEIVDHFTYV FMGDGCLMEG ISHEVCSLAG TLGLGKLIGF YDHNGISIDG ETEGWFTDDT AKRFEAYHWH
0211 VIHEIDGHDP QAVKEAILEA QSVKDKPSLI ICRTVIGFGS PNKAGKEEAH GAPLGEEEVA LARQKLGWHH
0281 PPFEIPKEIY HAWDAREKGE KAQQSWNEKF AAYKKAHPQL AEEFTRRMSG GLPKDWEKTT QKYINELQAN
0351 PAKIATRKAS QNTLNAYGPM LPELLGGSAD LAPSNLTIWK GSVSLKEDPA GNYIHYGVRE FGMTAIANGI
0421 AHHGGFVPYT ATFLMFVEYA RNAARMAALM KARQIMVYTH DSIGLGEDGP THQAVEQLAS LRLTPNFSTW
0491 RPCDQVEAAV GWKLAVERHN GPTALILSRQ NLAQVERTPD QVKEIARGGY VLKDSGGKPD IILIATGSEM
0561 EITLQAAEKL AGEGRNVRVV SLPSTDIFDA QDEEYRESVL PSNVAARVAV EAGIADYWYK YVGLKGAIVG
0631 MTGYGESAPA DKLFPFFGFT AENIVAKAHK VLGVKGA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GTAGAAAAAC TGTCTGAAGG CATTCGTCTG
-070 TTCGCCGTTG ATCAACGCAA ACTGGAAGAT CTTCTTGCCG CCAAACTATA AACCAGCCAC GGAGTGTTAT
0001 atgtcccgaa aagaccttgc caatgcgatt cgcgcactca gtatggatgc ggtacaaaaa gccaactctg
0071 gtcatcccgg cgcgccgatg ggcatggctg atattgccga agtgctgtgg aacgattttc ttaaacataa
0141 ccctaccgac ccaacctggt atgatcgcga ccgctttatt ctttccaacg gtcacgcgtc gatgctgctc
0211 tacagtttgc tacatctgac cggttacgac ctgccgctgg aagaactgaa gaacttccgt cagttgcatt
0281 cgaaaacccc aggccacccg gagattggct atacgccagg cgttgaaacc accaccggcc cgcttggaca
0351 aggtttggcg aacgccgtcg ggctggcgat agcagagcgt acactggcgg cgcagtttaa ccagccagac
0421 catgagatcg tcgatcactt cacctatgtg tttatgggcg acggctgcct gatggaaggt atttcccacg
0491 aagtctgttc gctggcaggc acgctgggac tgggcaagct gattggtttt tacgatcaca acggtatttc
0561 catcgacggt gaaacagaag gctggtttac cgacgatacg gcaaaacgtt ttgaagccta tcactggcat
0631 gtgatccatg aaatcgacgg tcacgatccg caggcggtga aggaagcgat ccttgaagcg caaagcgtga
0701 aagataagcc gtcgctgatt atctgccgta cggtgattgg ctttggttcg ccgaataaag caggtaagga
0771 agaggcgcac ggcgcaccac tgggggaaga agaagtggcg ctggcacggc aaaaactggg ctggcaccat
0841 ccgccatttg agatccctaa agagatttat cacgcctggg atgcccgtga aaaaggcgaa aaagcgcagc
0911 agagctggaa tgagaagttt gccgcctata aaaaggctca tccgcaactg gcagaagagt ttacccgacg
0981 gatgagcggt ggtttaccga aggactggga gaaaacgact cagaaatata tcaatgagtt acaggcaaat
1051 ccggcgaaaa tcgctacccg taaggcttcg caaaatacgc ttaacgctta cgggccgatg ctgcctgagt
1121 tgctcggcgg ttcggcggat ctggctccca gcaacctgac catctggaaa ggttctgttt cgctgaagga
1191 agatccagcg ggcaactaca ttcactacgg ggtgcgtgaa tttggcatga ccgctatcgc caacggcatc
1261 gcgcaccacg gcggctttgt gccgtatacc gcgacgttcc tgatgtttgt tgaatacgcc cgtaacgccg
1331 cgcggatggc ggcactgatg aaagcgcggc agattatggt ttatacccac gactcaattg gcctgggcga
1401 agatggtccg acgcaccagg ctgttgagca actggccagc ctgcgcttaa cgccaaattt cagcacctgg
1471 cgaccgtgcg atcaggtgga agcggcggtg ggctggaagc tggcggttga gcgccacaac ggaccgacgg
1541 cactgatcct ctcaaggcag aatctggccc aggtggaacg tacgccggat caggttaaag agattgctcg
1611 tggcggttat gtgctgaaag acagcggcgg taagccagat attattctga ttgccaccgg ttcagagatg
1681 gaaattaccc tgcaagcggc agagaaatta gcaggagaag gtcgcaatgt acgcgtagtt tccctgccct
1751 cgaccgatat tttcgacgcc caggatgagg aatatcggga gtcggtgttg ccttctaacg ttgcggctcg
1821 cgtggcggtg gaagcaggta ttgccgatta ctggtacaag tatgttggtc tgaaaggggc aattgtcggg
1891 atgacgggtt acggggaatc tgctccggcg gataagctgt tcccgttctt tggctttacc gccgagaata
1961 ttgtggcaaa agcgcataag gtgctgggag tgaaaggtgc ctgaTGGTGA TTGCCGGATG CTGATTGCCG
2031 GATGCGACGC TGACGCGTCT TATCCGGCCT ACAGCGTCTT ATCCGGCCTA CATGTCCCGC CATTTTGTTT
2101 AACG
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