|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
rlpA
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
rlpA
Search strains by all related name:
rlpA b0633 ECK0626 JW0628
|
General information (Go to Linear View: )
|
|
Gene Name
|
rlpA
|
|
Alternative name
|
b0633,ECK0626,JW0628
|
|
Location, Length
|
664,524 - 665,612
(
-
)
;
14.30
min
;
1089
(bp) ,
362
(aa)
|
|
Product
|
minor lipoprotein
|
|
Note
|
ECK0626:JW0628:b0633
|
|
Function
|
|
|
PID
|
1651260
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
RLPA_ECOLI
(
P10100
)
|
|
- Protein name
|
RecName: Full=Rare lipoprotein A; Flags: Precursor;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=rlpA; OrderedLocusNames=b0633, JW0628;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
minor lipoprotein [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
|
MMBR References
|
J Bacteriol. 1987;169(12):5692-9.
Genes encoding two lipoproteins in the leuS-dacA region of the Escherichia coli chromosome.
Takase I, Ishino F, Wachi M, Kamata H, Doi M, Asoh S, Matsuzawa H, Ohta T, Matsuhashi M.
(
3316191
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MRKQWLGICI AAGMLAACTS DDGQQQTVSV PQPAVCNGPI VEISGADPRF EPLNATANQD YQRDGKSYKI
0071 VQDPSRFSQA GLAAIYDAEP GSNLTASGEA FDPTQLTAAH PTLPIPSYAR ITNLANGRMI VVRINDRGPY
0141 GNDRVISLSR AAADRLNTSN NTKVRIDPII VAQDGSLSGP GMACTTVAKQ TYALPAPPDL SGGAGTSSVS
0211 GPQGDILPVS NSTLKSEDPT GAPVTSSGFL GAPTTLAPGV LEGSEPTPAP QPVVTAPSTT PATSPAMVTP
0281 QAVSQSASGN FMVQVGAVSD QARAQQYQQQ LGQKFGVPGR VTQNGAVWRI QLGPFASKAE ASTLQQRLQT
0351 EAQLQSFITT AQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ggaggatcgg cgctaattgt gctgatggct
-070 gggttcggga ttgtaatgtc aatccacacc cacaggaaaa tgttgtcgaa aagcgtgtaa gaggtgcgca
0001 atgcgtaagc agtggctcgg gatctgcatc gcggcaggaa tgctcgcggc atgtacaagc gatgatggtc
0071 agcaacagac ggtaagtgta ccgcagcctg cggtatgtaa cggccctata gttgaaatta gcggggcgga
0141 cccgcgtttc gaaccactga acgcgacggc aaatcaggat taccagcgcg acggtaaaag ctacaaaatc
0211 gtgcaggatc cgtctcgatt tagccaggcg ggactggcgg caatctatga tgccgaaccc ggcagtaacc
0281 tgacggcctc tggcgaagca ttcgatccga cacagctgac ggcagcccat ccaacgcttc cgatccccag
0351 ctacgccaga atcactaacc tggctaacgg gcgaatgatc gtggtgcgca ttaatgatcg cggcccttac
0421 ggcaacgacc gcgttatttc actttctcgc gcggcagctg accgtcttaa cacgtcaaac aacaccaaag
0491 ttcgtatcga tccgattatt gttgcccagg atggttcgct ttctggtcct ggtatggctt gtaccacagt
0561 cgccaaacag acttacgccc tgcctgcacc tcccgattta agcggtggcg cgggaacaag ttcagtgtct
0631 ggcccgcagg gtgacattct tccggtcagt aattcgacgc taaaaagcga agatccgacc ggcgcgccgg
0701 taaccagtag cggtttcctc ggcgcaccaa cgaccttagc gcctggtgta ctggaaggca gcgaaccgac
0771 gcctgcgcca cagcccgttg ttacagctcc gtcgacaacg cctgcaacct cgcctgcaat ggtgacaccg
0841 caagccgtct cgcaaagcgc cagcggcaac tttatggtgc aagtcggggc cgtaagcgat caggctcgtg
0911 cgcaacagta ccaacagcaa ctgggacaga agttcggcgt ccccggtcgc gtaactcaaa atggcgcggt
0981 ctggcggatc cagcttggcc cattcgccag caaagccgaa gccagtacct tgcagcaacg tttgcaaacc
1051 gaagcccaat tacagtcatt tattactacc gcgcagtagc gtaaagcagg catctgatgt gtcaatttct
1121 gtaaatgacg ttaacaaagt cacgcggaaa gtcagatgcc tgccggtagt gcatttgcta tagtagggc
|
