MG1655
W3110
Search for
  Japanese | English
Top Genes Deletions Circular Linear Motif SequenceCutter Download Strains
Gene Report : pdxK
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
Related gene (MG1655 PEC)
     Gene Search Search MG1655 PEC by gene name:  pdxK
Related strains
     Strains Search Search strains by gene name:  pdxK   Search strains by all related name:  pdxK b2418 ECK2413 JW2411 pdxL thiJ yfeI

General information  (Go to Linear View:)
 Gene Name pdxK  
 Alternative name b2418,ECK2413,JW2411,pdxL,thiJ,yfeI  
 Location, Length 2,541,832 - 2,542,683 (  -  ) ;   54.71 min ; 852 (bp) ,   283 (aa) Go to Linear View
 Product pyridoxal-pyridoxaminekinase/hydroxymethylpyrimidine kinase  
 Note ECK2413:JW2411:b2418  
 Function  
 PID 1799837  
SWISS-PROT  ( Show details )
  botton Entry name(Acc.no) PDXK_ECOLI ( P40191 ; P76964 )
    -  Protein name RecName: Full=Pyridoxine kinase; EC=2.7.1.35; AltName: Full=Pyridoxal kinase; AltName: Full=Vitamin B6 kinase; AltName: Full=Pyridoxamine kinase; AltName: Full=PN/PL/PM kinase;  
    -  Synonyms  
    -  Gene name Name=pdxK; Synonyms=yfeI; OrderedLocusNames=b2418, JW2411;  

 Linear View
View Location
   2530.0  –  2555.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB
         PSI-BLAST  
    SWISS-PROT
         BLAST RecName: Full=Pyridoxine kinase; AltName: Full=Pyridoxal kinase; AltName: Full=Vitamin B6 kinase; AltName: Full=Pyridoxamine kinase; AltName: Full=PN/PL/PM kinase  
         PSI-BLAST RecName: Full=Pyridoxine kinase; AltName: Full=Pyridoxal kinase; AltName: Full=Vitamin B6 kinase; AltName: Full=Pyridoxamine kinase; AltName: Full=PN/PL/PM kinase
    nr
         BLAST pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase [Escherichia coli str. K-12 substr. MG1655]  
Pfam 27.0   (database updated : 2013-03 )
    Pfam

Other Cross-Reference
    EcoCyc pdxK 

Sequences
Amino acid
FASTA format 
0001 MSSLLLFNDK SRALQADIVA VQSQVVYGSV GNSIAVPAIK QNGLNVFAVP TVLLSNTPHY DTFYGGAIPD 
0071 EWFSGYLRAL QERDALRQLR AVTTGYMGTA SQIKILAEWL TALRKDHPDL LIMVDPVIGD IDSGIYVKPD 
0141 LPEAYRQYLL PLAQGITPNI FELEILTGKN CRDLDSAIAA AKSLLSDTLK WVVVTSASGN EENQEMQVVV 
0211 VTADSVNVIS HSRVKTDLKG TGDLFCAQLI SGLLKGKALT DAVHRAGLRV LEVMRYTQQH ESDELILPPL 
0281 AEA
Nucleotide
FASTA format

View sequence out neighbor 100bp 
-100                                             ttaccttatc cttgttttgt gatagccgat 
-070 ttgactgcca gaatcaggta aagtttcggt tggattacga tgaggatcat cggcaaggag aaaaaattaa 
0001 atgagtagtt tgttgttgtt taacgataag agtagggcac tgcaggcgga tatcgtcgcc gtgcagtcgc 
0071 aggtggttta cggcagcgtg ggcaacagca ttgccgtgcc tgctatcaaa cagaacggcc tgaatgtctt 
0141 tgccgtgccg acggtattgc tgagcaatac gccgcattat gacactttct acggtggtgc gattccggac 
0211 gaatggttta gcggctattt gcgtgcgctt caggagcgtg atgcgctgcg ccaacttcgt gctgtaacca 
0281 cgggctatat gggaacggca tcgcaaatca aaatccttgc cgagtggctg actgcgctac gcaaagacca 
0351 tcctgaccta ttgatcatgg tcgatccggt gattggcgat attgatagcg gaatttatgt caaacctgac 
0421 cttcccgaag cgtatcgaca atatttactg ccgctggcgc agggaattac ccccaatatc tttgagttgg 
0491 aaatcctgac cggtaaaaat tgccgcgatc tcgacagtgc cattgctgcc gcaaaaagtc tgctttcaga 
0561 cacattaaaa tgggtggtgg ttaccagcgc ctccggtaat gaagaaaatc aggagatgca ggttgtggtg 
0631 gtcactgccg acagcgtgaa tgtcatttcc cattcacggg taaaaaccga cctgaaaggg actggcgacc 
0701 tgttttgtgc tcagctcatc agtggcttgc tgaaagggaa ggcgttaacc gatgcagtgc accgagcggg 
0771 gttgcgcgta ctggaagtga tgcgctacac ccagcagcat gagagcgatg aattgatttt gccgccgctg 
0841 gcggaagcat aaaaaaatgg cgccgatggg cgccattttt cactgcggca agaattactt cttgatgcgg 
0911 ataaccgggg tttcacccac ggttacgcta ccggacagtt tg