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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
nth
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Related strains
|
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Strains Search
|
Search strains by gene name:
nth
Search strains by all related name:
nth b1633 ECK1629 JW1625
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General information (Go to Linear View: )
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Gene Name
|
nth
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Alternative name
|
b1633,ECK1629,JW1625
|
|
Location, Length
|
1,713,237 - 1,713,872
(
+
)
;
36.87
min
;
636
(bp) ,
211
(aa)
|
|
Product
|
DNA glycosylase and apyrimidinic (AP) lyase
|
|
Note
|
ECK1629:JW1625:b1633; endonuclease III
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Function
|
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PID
|
1742691
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
END3_ECOLI
(
P0AB83
;
P20625
)
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- Protein name
|
RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase;
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- Synonyms
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- Gene name
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Name=nth; OrderedLocusNames=b1633, JW1625;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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RecName: Full=Endonuclease III; AltName: Full=DNA-
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PSI-BLAST
|
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nr
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BLAST
|
DNA glycosylase and apyrimidinic
|
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
|
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MMBR References
|
Proc Natl Acad Sci U S A. 1985;82:474-478
Endonuclease III (nth) mutants of Escherichia coli.
Cunningham, R. P., and B. Weiss.
|
| Sequences |
Amino acid
FASTA format
|
0001 MNKAKRLEIL TRLRENNPHP TTELNFSSPF ELLIAVLLSA QATDVSVNKA TAKLYPVANT PAAMLELGVE
0071 GVKTYIKTIG LYNSKAENII KTCRILLEQH NGEVPEDRAA LEALPGVGRK TANVVLNTAF GWPTIAVDTH
0141 IFRVCNRTQF APGKNVEQVE EKLLKVVPAE FKVDCHHWLI LHGRYTCIAR KPRCGSCIIE DLCEYKEKVD
0211 I
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TGCTGGCAGG AAAATACCTG ATTGATGAAA
-070 GAATGAAAAA GCGCCGTGCT GAAGCAGCTG CAGAACGTGC ATTGCCAAAC GGTGAAACAG GGAATGTCTG
0001 atgaataaag caaaacgcct ggagatcctc actcgcctgc gtgagaacaa tcctcatccc accaccgagc
0071 ttaatttcag ttcgcctttt gaattgctga ttgccgtact gctttccgct caggcgaccg atgtcagtgt
0141 taataaggcg acggcgaaac tctacccggt ggcgaatacg cctgcagcga tgcttgaact gggcgttgaa
0211 ggggtgaaaa cctatatcaa aacgattggg ctttataaca gcaaagcaga aaatatcatc aaaacctgcc
0281 gtatcttgct ggagcagcat aatggcgagg ttccggaaga tcgtgctgcg cttgaagccc tgcccggcgt
0351 aggtcgtaaa acagccaacg tcgtattaaa cactgcattc ggctggccga ctattgctgt cgacacgcac
0421 attttccgcg tttgtaatcg tactcaattt gcgccgggga aaaacgtcga acaggtagaa gaaaagctac
0491 tgaaagtggt tccagcagag tttaaagtcg actgccacca ttggttgatc ctgcacgggc gttatacctg
0561 cattgcccgc aagccccgct gtggctcttg tattattgaa gatctttgtg aatacaaaga gaaagttgac
0631 atctgaAGAA AAGGGGTAAC ACCGATTACC CCATTGATAA CCTTTCTTTA TCCTCTTTTA AAACATCTTT
0701 TTAACGTCAA TGATGCCATT GCTTAGCGTT ATCATC
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