|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
idi
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
idi
Search strains by all related name:
idi b2889 ECK2884 JW2857 ygfV
|
General information (Go to Linear View: )
|
|
Gene Name
|
idi
|
|
Alternative name
|
b2889,ECK2884,JW2857,ygfV
|
|
Location, Length
|
3,031,721 - 3,032,269
(
+
)
;
65.25
min
;
549
(bp) ,
182
(aa)
|
|
Product
|
isopentenyl diphosphate isomerase
|
|
Note
|
ECK2884:JW2857:b2889
|
|
Function
|
|
|
PID
|
85675701
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
IDI_ECOLI
(
Q46822
;
Q2M9V2
)
|
|
- Protein name
|
RecName: Full=Isopentenyl-diphosphate Delta-isomerase; Short=IPP isomerase; EC=5.3.3.2; AltName: Full=Isopentenyl pyrophosphate isomerase; AltName: Full=IPP:DMAPP isomerase;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=idi; Synonyms=ygfV; OrderedLocusNames=b2889, JW2857;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
Chain A, Structure And Mechanism Of Action Of Isopentenylpyrophosphate-Dimethylallylpyrophosphate Isomerase: Complex With Nipp
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MQTEHVILLN AQGVPTGTLE KYAAHTADTR LHLAFSSWLF NAKGQLLVTR RALSKKAWPG VWTNSVCGHP
0071 QLGESNEDAV IRRCRYELGV EITPPESIYP DFRYRATDPS GIVENEVCPV FAARTTSALQ INDDEVMDYQ
0141 WCDLADVLHG IDATPWAFSP WMVMQATNRE ARKRLSAFTQ LK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 CGCTCAAAAC GGGCGGTTGT CGATAAACGC
-070 TCACTTGGTT AATCATTTCA CTCTTCAATT ATCTATAATG ATGAGTGATC AGAATTACAT GTGAGAAATT
0001 atgcaaacgg aacacgtcat tttattgaat gcacagggag ttcccacggg tacgctggaa aagtatgccg
0071 cacacacggc agacacccgc ttacatctcg cgttctccag ttggctgttt aatgccaaag gacaattatt
0141 agttacccgc cgcgcactga gcaaaaaagc atggcctggc gtgtggacta actcggtttg tgggcaccca
0211 caactgggag aaagcaacga agacgcagtg atccgccgtt gccgttatga gcttggcgtg gaaattacgc
0281 ctcctgaatc tatctatcct gactttcgct accgcgccac cgatccgagt ggcattgtgg aaaatgaagt
0351 gtgtccggta tttgccgcac gcaccactag tgcgttacag atcaatgatg atgaagtgat ggattatcaa
0421 tggtgtgatt tagcagatgt attacacggt attgatgcca cgccgtgggc gttcagtccg tggatggtga
0491 tgcaggcgac aaatcgcgaa gccagaaaac gattatctgc atttacccag cttaaataaA AAAACCCCGA
0561 CATTTGCCGG GGTTGTGAGC ATAACGTAAT GCTTATTTTA CCGGACGCAT CGCCGGGAAC AGAATAACGT
0631 CGCGGATGGT ATGGCTGTT
|
