|
PEC Original Annotations
|
|
Essentiality
|
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Class
|
non-essential
|
|
References (PMID)
|
J Basic Microbiol. 1995;35(4):217-27.
The fix Escherichia coli region contains four genes related to carnitine metabolism.
Eichler K, Buchet A, Bourgis F, Kleber HP, Mandrand-Berthelot MA.
(
7473063
)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
fixX
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
fixX
Search strains by all related name:
fixX b0044 ECK0045 JW0043 yaaT
|
General information (Go to Linear View: )
|
|
Gene Name
|
fixX
|
|
Alternative name
|
b0044,ECK0045,JW0043,yaaT
|
|
Location, Length
|
45,463 - 45,750
(
+
)
;
0.98
min
;
288
(bp) ,
95
(aa)
|
|
Product
|
predicted 4Fe-4S ferredoxin-type protein
|
|
Note
|
ECK0045:JW0043:b0044
|
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Function
|
|
|
PID
|
85674299
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
FIXX_ECOLI
(
P68646
;
P31576; P75627
)
|
|
- Protein name
|
RecName: Full=Ferredoxin-like protein fixX;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=fixX; Synonyms=yaaT; OrderedLocusNames=b0044, JW0043;
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
RecName: Full=Ferredoxin-like protein fixX
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
putative ferredoxin [Escherichia coli O157:H7 EDL933]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MTSPVNVDVK LGVNKFNVDE EHPHIVVKAD ADKQALELLV KACPAGLYKK QDDGSVRFDY AGCLECGTCR
0071 ILGLGSALEQ WEYPRGTFGV EFRYG
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GCAGCGCGCC GGAACTGATG CGCAAGAAAA
-070 TCCTCCGCCA CGGCAAGAAA GTGGGCTTCA TCAATCTAAT CAAGGATGGC ATGAAAGGAG TGACCGTTTT
0001 atgacttctc ccgtcaatgt ggacgtcaaa ctgggcgtca ataaattcaa tgtcgatgaa gagcatccgc
0071 acattgttgt gaaggccgat gctgataaac aggcgctgga gctgctggtg aaagcgtgcc ccgcaggtct
0141 gtacaagaag caggatgacg gcagtgtgcg cttcgattac gccggatgtc tggagtgcgg cacctgtcgc
0211 attctggggc tggggtcggc gctggaacag tgggaatacc cgcgcggcac ctttggtgtg gagttccgtt
0281 acggctgaTG TTGGTTTGAT ACGTAACGCC GCACTGACTC TCATTGCAAA AAACAGGAAT AACCATGCAA
0351 CCGTCCAGAA ACTTTGACGA TCTCAAATTC TCCTCTAT
|
