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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
endA
|
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Related strains
|
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Strains Search
|
Search strains by gene name:
endA
Search strains by all related name:
endA b2945 ECK2940 JW2912
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General information (Go to Linear View: )
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Gene Name
|
endA
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Alternative name
|
b2945,ECK2940,JW2912
|
|
Location, Length
|
3,089,003 - 3,089,710
(
+
)
;
66.48
min
;
708
(bp) ,
235
(aa)
|
|
Product
|
DNA-specific endonuclease I
|
|
Note
|
ECK2940:JW2912:b2945
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Function
|
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PID
|
85675755
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
END1_ECOLI
(
P25736
;
Q2M9P8
)
|
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- Protein name
|
RecName: Full=Endonuclease-1; EC=3.1.21.1; AltName: Full=Endonuclease I; Short=Endo I; Flags: Precursor;
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- Synonyms
|
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- Gene name
|
Name=endA; OrderedLocusNames=b2945, JW2912;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
|
Chain A, The N69q Mutant Of Vibrio Cholerae Endonuclease I
|
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SWISS-PROT
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BLAST
|
|
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PSI-BLAST
|
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nr
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BLAST
|
DNA-specific endonuclease I [Escherichia coli str. K-12 substr. MG1655]
|
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
|
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MMBR References
|
J Bacteriol. 1971;107(1):87-94.
Mutants of Escherichia coli lacking endonuclease I, ribonuclease I, or ribonuclease II.
Wright M.
(
4105037
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MYRYLSIAAV VLSAAFSGPA LAEGINSFSQ AKAAAVKVHA DAPGTFYCGC KINWQGKKGV VDLQSCGYQV
0071 RKNENRASRV EWEHVVPAWQ FGHQRQCWQD GGRKNCAKDP VYRKMESDMH NLQPSVGEVN GDRGNFMYSQ
0141 WNGGEGQYGQ CAMKVDFKEK AAEPPARARG AIARTYFYMR DQYNLTLSRQ QTQLFNAWNK MYPVTDWECE
0211 RDERIAKVQG NHNPYVQRAC QARKS
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AAATAACCAT CTGAACTATC AGGAACTTTC
-070 CTGATCTGGC TGATTGCATA CCAAAACAGC TTTCGCTACG TTGCTGGCTC GTTTTAACAC GGAGTAAGTG
0001 atgtaccgtt atttgtctat tgctgcggtg gtactgagcg cagcattttc cggcccggcg ttggccgaag
0071 gtatcaatag tttttctcag gcgaaagccg cggcggtaaa agtccacgct gacgcgcccg gtacgtttta
0141 ttgcggatgt aaaattaact ggcagggcaa aaaaggcgtt gttgatctgc aatcgtgcgg ctatcaggtg
0211 cgcaaaaatg aaaaccgcgc cagccgcgta gagtgggaac atgtcgttcc cgcctggcag ttcggtcacc
0281 agcgccagtg ctggcaggac ggtggacgta aaaactgcgc taaagatccg gtctatcgca agatggaaag
0351 cgatatgcat aacctgcagc cgtcagtcgg tgaggtgaat ggcgatcgcg gcaactttat gtacagccag
0421 tggaatggcg gtgaaggcca gtacggtcaa tgcgccatga aggtcgattt caaagaaaaa gctgccgaac
0491 caccagcgcg tgcacgcggt gccattgcgc gcacctactt ctatatgcgc gaccaataca acctgacact
0561 ctctcgccag caaacgcagc tgttcaacgc atggaacaag atgtatccgg ttaccgactg ggagtgcgag
0631 cgcgatgaac gcatcgcgaa ggtgcagggc aatcataacc cgtatgtgca acgcgcttgc caggcgcgaa
0701 agagctaaCC TACACTAGCG GGATTCTTTT TGTTAACCCC TACCCCACGC GTACAACCGC GTGGGGAGAC
0771 GACGCGGATT TTTAACTATG CGTATCCCCC GCATTTAT
|
