|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
dgoK
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
dgoK
Search strains by all related name:
dgoK b3693 ECK3686 JW3670 yidV
|
General information (Go to Linear View: )
|
|
Gene Name
|
dgoK
|
|
Alternative name
|
b3693,ECK3686,JW3670,yidV
|
|
Location, Length
|
3,765,941 - 3,766,819
(
+
)
;
81.05
min
;
879
(bp) ,
292
(aa)
|
|
Product
|
2-oxo-3-deoxygalactonate kinase
|
|
Note
|
ECK3686:JW3670:b3693
|
|
Function
|
|
|
PID
|
85676350
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
DGOK_ECOLI
(
P31459
;
Q2M806
)
|
|
- Protein name
|
RecName: Full=2-dehydro-3-deoxygalactonokinase; EC=2.7.1.58; AltName: Full=2-keto-3-deoxy-galactonokinase; AltName: Full=2-oxo-3-deoxygalactonate kinase;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=dgoK; Synonyms=yidV; OrderedLocusNames=b3693, JW3670;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
2-oxo-3-deoxygalactonate kinase [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
|
MMBR References
|
Science. 1995;267(5201):1159-61.
A functionally diverse enzyme superfamily that abstracts the alpha protons of carboxylic acids.
Babbitt PC, Mrachko GT, Hasson MS, Huisman GW, Kolter R, Ringe D, Petsko GA, Kenyon GL, Gerlt JA.
(
7855594
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MTARYIAIDW GSTNLRAWLY QGDHCLESRQ SEAGVTRLNG KSPAAVLAEV TTDWREEKTP VVMAGMVGSN
0071 VGWKVAPYLS VPACFSSIGE QLTSVGDNIW IIPGLCVSHD DNHNVMRGEE TQLIGARALA PSSLYVMPGT
0141 HCKWVQADSQ QINDFRTVMT GELHHLLLNH SLIGAGLPPQ ENSADAFTAG LERGLNTPAI LPQLFEVRAS
0211 HVLGTLPREQ VSEFLSGLLI GAEVASMRDY VAHQHAITLV AGTSLTARYQ QAFQAMGCDV TAVAGDTAFQ
0281 AGIRSIAHAV AN
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 AGGCGCTGTT CGATGCGATA CGACATCAGG
-070 ACGGCGATGC GGCAGAGCAG GCGGCGCTTA CCATGATCGC CAGCTCGACA CGAAGGTTAA AGGAAATCAC
0001 atgacagctc gctacatcgc aattgactgg ggatcgacca atctgcgcgc ctggctttat cagggcgacc
0071 actgcctgga gagcaggcaa tcagaagcag gcgtcacgcg cctgaacgga aaatctccgg ctgcggtgtt
0141 agcagaagtc acgaccgact ggcgtgaaga gaaaacgcca gtggtaatgg caggaatggt tggcagcaac
0211 gtcggctgga aagttgcacc gtatttatct gttcctgcct gtttttcgtc tattggcgaa caattaacgt
0281 cagttggcga caatatctgg attattcccg gattatgtgt ctctcatgac gataaccaca atgtgatgcg
0351 cggcgaagaa acacaattga tcggcgcgcg agctctggct ccttcctctc tttatgtcat gcccggaacc
0421 cattgcaaat gggtgcaggc cgatagccag caaatcaacg attttcgcac cgtgatgacc ggtgaattac
0491 atcatttact gttaaatcac tcattgattg gcgcaggttt gccgccgcag gaaaactctg ccgatgcctt
0561 cacagctggc cttgagcgtg gtcttaatac gcccgccata ttgccgcagc tttttgaagt tcgcgcctcg
0631 catgtgctgg gaacacttcc ccgcgaacag gtcagcgaat ttctctctgg tttgttgatt ggcgcagagg
0701 tcgccagtat gcgcgactat gtggcccatc aacacgccat cacccttgtc gccggaacat cgctgaccgc
0771 gcgctaccag caagcctttc aggcgatggg ttgcgacgtg acggcggtgg cgggcgacac ggcatttcag
0841 gctggtataa ggagcatcgc tcatgcagtg gcaaactaaA CTCCCGCTGA TCGCCATTTT GCGCGGTATT
0911 ACGCCCGACG AGGCGCTGGC GCATGTTGGC GCGGTGATTG ACGCCGGGTT CGACGCGGTT GAAATCCCG
|
