|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
Escherichia coli and Salmonella, Cellular and Molecular Biology Second Edition. ASM Press. 1996
Neidhart, F.C.
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
cobC
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
cobC
Search strains by all related name:
cobC b0638 ECK0631 JW0633 phpB
|
General information (Go to Linear View: )
|
|
Gene Name
|
cobC
|
|
Alternative name
|
b0638,ECK0631,JW0633,phpB
|
|
Location, Length
|
669,718 - 670,329
(
-
)
;
14.41
min
;
612
(bp) ,
203
(aa)
|
|
Product
|
predicted alpha-ribazole-5'-P phosphatase
|
|
Note
|
ECK0631:JW0633:b0638
|
|
Function
|
|
|
PID
|
4062256
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
COBC_ECOLI
(
P52086
;
P77109
)
|
|
- Protein name
|
RecName: Full=Alpha-ribazole phosphatase; EC=3.1.3.73; AltName: Full=Alpha-ribazole-5'-phosphate phosphatase;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=cobC; Synonyms=phpB; OrderedLocusNames=b0638, JW0633;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
predicted alpha-ribazole-5'-P phosphatase [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MRLWLIRHGE TQANIDGLYS GHAPTPLTAR GIEQAQNLHT LLHGVSFDLV LCSELERAQH TARLVLSDRQ
0071 LPVQIIPELN EMFFGDWEMR HHRDLMQEDA ENYSAWCNDW QHAIPTNGEG FQAFSQRVER FIARLSEFQH
0141 YQNILVVSHQ GVLSLLIARL IGMPAEAMWH FRVDQGCWSA IDINQKFATL RVLNSRAIGV ENA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 aaaacggtga atcatgtgag gatttattgc
-070 cggaaccggt actgacttac attaaccaac aaggcttgta tcgctgatac ctgtcgttac ggagggcatg
0001 atgcgactgt ggttaattcg tcatggtgaa acgcaagcga atatcgatgg tctttacagc ggtcatgcgc
0071 ccacccccct gaccgcgcgc ggtattgagc aagcgcaaaa tctgcatacg ctgctacatg gtgtttcctt
0141 tgatctggtt ttatgcagtg aactggaacg ggcacagcat accgcgcgac tggttctcag tgaccgccag
0211 ctccccgtgc aaatcatacc tgaactcaac gaaatgtttt ttggcgactg ggagatgcga catcatcgcg
0281 acctcatgca agaagatgcc gaaaactata gcgcgtggtg caatgactgg cagcatgcaa tccccacgaa
0351 cggtgaagga tttcaggcat tttcgcaacg tgtggaacgc tttatcgcaa ggcttagtga atttcagcac
0421 tatcagaata ttttagtcgt cagccatcag ggtgtactga gtctgttaat cgcccgttta attggcatgc
0491 ctgccgaagc tatgtggcat tttcgcgttg accaggggtg ttggagcgcc attgatatca accaaaaatt
0561 cgcgacgcta cgcgtcctca atagccgtgc catcggggtc gagaatgcat gacttttctg tttttttacg
0631 ggtaagccgc aacgaccatt gacagacccg ggcaggctga tattctccgc agccagactt tttccgccag
0701 acacgacttt gt
|
