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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
carB
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Related strains
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Strains Search
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Search strains by gene name:
carB
Search strains by all related name:
carB b0033 cap ECK0034 JW0031 pyrA
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General information (Go to Linear View: )
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Gene Name
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carB
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Alternative name
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b0033,cap,ECK0034,JW0031,pyrA
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Location, Length
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30,817 - 34,038
(
+
)
;
0.66
min
;
3222
(bp) ,
1073
(aa)
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Product
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carbamoyl-phosphate synthase large subunit
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Note
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ECK0034:JW0031:b0033
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Function
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PID
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21321915
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
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CARB_ECOLI
(
P00968
)
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- Protein name
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RecName: Full=Carbamoyl-phosphate synthase large chain; EC=6.3.5.5; AltName: Full=Carbamoyl-phosphate synthetase ammonia chain;
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- Synonyms
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- Gene name
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Name=carB; Synonyms=pyrA; OrderedLocusNames=b0033, JW0031;
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MMBR References
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J Bacteriol. 1980;143(2):921-5.
Use of gene cloning to determine polarity of an operon: genes carAB of Escherichia coli.
Crabeel M, Charlier D, Weyens G, Feller A, Pierard A, Glansdorff N.
(
6451616
)
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| Sequences |
Amino acid
FASTA format
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0001 MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM ADATYIEPIH
0071 WEVVRKIIEK ERPDAVLPTM GGQTALNCAL ELERQGVLEE FGVTMIGATA DAIDKAEDRR RFDVAMKKIG
0141 LETARSGIAH TMEEALAVAA DVGFPCIIRP SFTMGGSGGG IAYNREEFEE ICARGLDLSP TKELLIDESL
0211 IGWKEYEMEV VRDKNDNCII VCSIENFDAM GIHTGDSITV APAQTLTDKE YQIMRNASMA VLREIGVETG
0281 GSNVQFAVNP KNGRLIVIEM NPRVSRSSAL ASKATGFPIA KVAAKLAVGY TLDELMNDIT GGRTPASFEP
0351 SIDYVVTKIP RFNFEKFAGA NDRLTTQMKS VGEVMAIGRT QQESLQKALR GLEVGATGFD PKVSLDDPEA
0421 LTKIRRELKD AGADRIWYIA DAFRAGLSVD GVFNLTNIDR WFLVQIEELV RLEEKVAEVG ITGLNADFLR
0491 QLKRKGFADA RLAKLAGVRE AEIRKLRDQY DLHPVYKRVD TCAAEFATDT AYMYSTYEEE CEANPSTDRE
0561 KIMVLGGGPN RIGQGIEFDY CCVHASLALR EDGYETIMVN CNPETVSTDY DTSDRLYFEP VTLEDVLEIV
0631 RIEKPKGVIV QYGGQTPLKL ARALEAAGVP VIGTSPDAID RAEDRERFQH AVERLKLKQP ANATVTAIEM
0701 AVEKAKEIGY PLVVRPSYVL GGRAMEIVYD EADLRRYFQT AVSVSNDAPV LLDHFLDDAV EVDVDAICDG
0771 EMVLIGGIME HIEQAGVHSG DSACSLPAYT LSQEIQDVMR QQVQKLAFEL QVRGLMNVQF AVKNNEVYLI
0841 EVNPRAARTV PFVSKATGVP LAKVAARVMA GKSLAEQGVT KEVIPPYYSV KEVVLPFNKF PGVDPLLGPE
0911 MRSTGEVMGV GRTFAEAFAK AQLGSNSTMK KHGRALLSVR EGDKERVVDL AAKLLKQGFE LDATHGTAIV
0981 LGEAGINPRL VNKVHEGRPH IQDRIKNGEY TYIINTTSGR RAIEDSRVIR RSALQYKVHY DTTLNGGFAT
1051 AMALNADATE KVISVQEMHA QIK
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Nucleotide
FASTA format
View sequence out neighbor 100bp
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-100 CCAGCCCTGG TCCACACGAC GCCGCGCCGT
-070 TGTTCGACCA CTTTATCGAG TTAATTGAGC AGTACCGTAA AACCGCTAAG TAATCAGGAG TAAAAGAGCC
0001 atgccaaaac gtacagatat aaaaagtatc ctgattctgg gtgcgggccc gattgttatc ggtcaggcgt
0071 gtgagtttga ctactctggc gcgcaagcgt gtaaagccct gcgtgaagag ggttaccgcg tcattctggt
0141 gaactccaac ccggcgacca tcatgaccga cccggaaatg gctgatgcaa cctacatcga gccgattcac
0211 tgggaagttg tacgcaagat tattgaaaaa gagcgcccgg acgcggtgct gccaacgatg ggcggtcaga
0281 cggcgctgaa ctgcgcgctg gagctggaac gtcagggcgt gttggaagag ttcggtgtca ccatgattgg
0351 tgccactgcc gatgcgattg ataaagcaga agaccgccgt cgtttcgacg tagcgatgaa gaaaattggt
0421 ctggaaaccg cgcgttccgg tatcgcacac acgatggaag aagcgctggc ggttgccgct gacgtgggct
0491 tcccgtgcat tattcgccca tcctttacca tgggcggtag cggcggcggt atcgcttata accgtgaaga
0561 gtttgaagaa atttgcgccc gcggtctgga tctctctccg accaaagagt tgctgattga tgagtcgctg
0631 atcggctgga aagagtacga gatggaagtg gtgcgtgata aaaacgacaa ctgcatcatc gtctgctcta
0701 tcgaaaactt cgatgcgatg ggcatccaca ccggtgactc catcactgtc gcgccagccc aaacgctgac
0771 cgacaaagaa tatcaaatca tgcgtaacgc ctcgatggcg gtgctgcgtg aaatcggcgt tgaaaccggt
0841 ggttccaacg ttcagtttgc ggtgaacccg aaaaacggtc gtctgattgt tatcgaaatg aacccacgcg
0911 tgtcccgttc ttcggcgctg gcgtcgaaag cgaccggttt cccgattgct aaagtggcgg cgaaactggc
0981 ggtgggttac accctcgacg aactgatgaa cgacatcact ggcggacgta ctccggcctc cttcgagccg
1051 tccatcgact atgtggttac taaaattcct cgcttcaact tcgaaaaatt cgccggtgct aacgaccgtc
1121 tgaccactca gatgaaatcg gttggcgaag tgatggcgat tggtcgcacg cagcaggaat ccctgcaaaa
1191 agcgctgcgc ggcctggaag tcggtgcgac tggattcgac ccgaaagtga gcctggatga cccggaagcg
1261 ttaaccaaaa tccgtcgcga actgaaagac gcaggcgcag atcgtatctg gtacatcgcc gatgcgttcc
1331 gtgcgggcct gtctgtggac ggcgtcttca acctgaccaa cattgaccgc tggttcctgg tacagattga
1401 agagctggtg cgtctggaag agaaagtggc ggaagtgggc atcactggcc tgaacgctga cttcctgcgc
1471 cagctgaaac gcaaaggctt tgccgatgcg cgcttggcaa aactggcggg cgtacgcgaa gcggaaatcc
1541 gtaagctgcg tgaccagtat gacctgcacc cggtttataa gcgcgtggat acctgtgcgg cagagttcgc
1611 caccgacacc gcttacatgt actccactta tgaagaagag tgcgaagcga atccgtctac cgaccgtgaa
1681 aaaatcatgg tgcttggcgg cggcccgaac cgtatcggtc agggtatcga attcgactac tgttgcgtac
1751 acgcctcgct ggcgctgcgc gaagacggtt acgaaaccat tatggttaac tgtaacccgg aaaccgtctc
1821 caccgactac gacacttccg accgcctcta cttcgagccg gtaactctgg aagatgtgct ggaaatcgtg
1891 cgtatcgaga agccgaaagg cgttatcgtc cagtacggcg gtcagacccc gctgaaactg gcgcgcgcgc
1961 tggaagctgc tggcgtaccg gttatcggca ccagcccgga tgctatcgac cgtgcagaag accgtgaacg
2031 cttccagcat gcggttgagc gtctgaaact gaaacaaccg gcgaacgcca ccgttaccgc tattgaaatg
2101 gcggtagaga aggcgaaaga gattggctac ccgctggtgg tacgtccgtc ttacgttctc ggcggtcggg
2171 cgatggaaat cgtctatgac gaagctgacc tgcgtcgcta cttccagacg gcggtcagcg tgtctaacga
2241 tgcgccagtg ttgctggacc acttcctcga tgacgcggta gaagttgacg tggatgccat ctgcgacggc
2311 gaaatggtgc tgattggcgg catcatggag catattgagc aggcgggcgt gcactccggt gactccgcat
2381 gttctctgcc agcctacacc ttaagtcagg aaattcagga tgtgatgcgc cagcaggtgc agaaactggc
2451 cttcgaattg caggtgcgcg gcctgatgaa cgtgcagttt gcggtgaaaa acaacgaagt ctacctgatt
2521 gaagttaacc cgcgtgcggc gcgtaccgtt ccgttcgtct ccaaagccac cggcgtaccg ctggcaaaag
2591 tggcggcgcg cgtgatggct ggcaaatcgc tggctgagca gggcgtaacc aaagaagtta tcccgccgta
2661 ctactcggtg aaagaagtgg tgctgccgtt caataaattc ccgggcgttg acccgctgtt agggccagaa
2731 atgcgctcta ccggggaagt catgggcgtg ggccgcacct tcgctgaagc gtttgccaaa gcgcagctgg
2801 gcagcaactc caccatgaag aaacacggtc gtgcgctgct ttccgtgcgc gaaggcgata aagaacgcgt
2871 ggtggacctg gcggcaaaac tgctgaaaca gggcttcgag ctggatgcga cccacggcac ggcgattgtg
2941 ctgggcgaag caggtatcaa cccgcgtctg gtaaacaagg tgcatgaagg ccgtccgcac attcaggacc
3011 gtatcaagaa tggcgaatat acctacatca tcaacaccac ctcaggccgt cgtgcgattg aagactcccg
3081 cgtgattcgt cgcagtgcgc tgcaatataa agtgcattac gacaccaccc tgaacggcgg ctttgccacc
3151 gcgatggcgc tgaatgccga tgcgactgaa aaagtaattt cggtgcagga aatgcacgca cagatcaaat
3221 aaTAGCGTGT CATGGCAGAT ATTTTTCATC CGCTAATTTG ATCGAATAAC TAATACGGTT CTCTGATGAG
3291 GACCGTTTTT TTTTGCCCAT TAAGTAAATC TT
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