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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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|
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
ryeA
|
|
Related strains
|
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Strains Search
|
Search strains by gene name:
ryeA
Search strains by all related name:
ryeA b4432 ECK1838 IS091 JWR0237 psrA8 sraC tpke79
|
General information (Go to Linear View: )
|
|
misc_RNA Name
|
ryeA
|
|
Alternative name
|
b4432,ECK1838,IS091,JWR0237,psrA8,sraC,tpke79
|
|
Location, Length
|
1,924,780 - 1,925,028
(
+
)
;
41.43
min
;
249
(bp) ,
|
|
Product
|
small RNA
|
|
Note
|
ECK1838:JWR0237:b4432
|
|
Function
|
|
|
PID
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Homology Analysis
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BLAST
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Bacteria
|
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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|
BLAST
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PSI-BLAST
|
|
|
nr
|
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BLAST
|
hypothetical protein EscherichcoliO157_31392 [Escherichia coli O157:H7 str. EC4024]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TCATCAATAT TTTCCTCCCG CGCTAAAGAT
-070 CACATAATCT TAACAAGAAT GTTAAAAAAC GCTGGACTCA GACAGTAGAG TGTGTGTTAT GGTTGACTAT
0001 aaagtcagcg aaggaaatgc ttctggcttt taacagataa aaagagaccg aacacgattc ctgtattcgg
0071 tccagggaaa tggctcttgg gagagagccg tgcgctaaaa gttggcatta atgcaggctt agttgccttg
0141 ccctttaaga atagatgacg acgccaggtt ttccagtttg cgtgcaaaat ggtcaataaa aagcgtggtg
0211 gtcatcagct gaaatgttaa aaaccgcccg ttctggtgaA AGAACTGAGG CGGTTTTTTT ATTGGAAATC
0281 AAAAGGCTAT TTTAGGTAAT TAACAGAGTT TTTCAGCTCG TTCTATAAAC GGTGCCAGAC TCATTTTTT
|
