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PEC Original Annotations
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Essentiality
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Class
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essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
secA
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Related strains
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Strains Search
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Search strains by gene name:
secA
Search strains by all related name:
secA azi b0098 ECK0099 JW0096 pea prlD
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General information (Go to Linear View: )
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Gene Name
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secA
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Alternative name
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azi,b0098,ECK0099,JW0096,pea,prlD
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Location, Length
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108,279 - 110,984
(
+
)
;
2.33
min
;
2706
(bp) ,
901
(aa)
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Product
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preprotein translocase subunit, ATPase that targets protein precursors to the SecYE core translocon
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Note
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ECK0099:JW0096:b0098
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Function
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PID
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85674325
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
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SECA_ECOLI
(
P10408
;
P75642
)
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- Protein name
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RecName: Full=Protein translocase subunit secA;
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- Synonyms
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- Gene name
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Name=secA; Synonyms=azi, pea, prlD; OrderedLocusNames=b0098, JW0096;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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PSI-BLAST
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nr
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BLAST
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preprotein translocase subunit, ATPase [Escherichia coli str. K-12 substr. MG1655]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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MMBR References
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J Bacteriol. 1995;177:4969-4973
Multicopy suppression of cold-sensitive sec mutations in Escherichia coli.
Danese, P. N., C. K. Murphy, and T. J. Silhavy.
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| Sequences |
Amino acid
FASTA format
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0001 MLIKLLTKVF GSRNDRTLRR MRKVVNIINA MEPEMEKLSD EELKGKTAEF RARLEKGEVL ENLIPEAFAV
0071 VREASKRVFG MRHFDVQLLG GMVLNERCIA EMRTGEGKTL TATLPAYLNA LTGKGVHVVT VNDYLAQRDA
0141 ENNRPLFEFL GLTVGINLPG MPAPAKREAY AADITYGTNN EYGFDYLRDN MAFSPEERVQ RKLHYALVDE
0211 VDSILIDEAR TPLIISGPAE DSSEMYKRVN KIIPHLIRQE KEDSETFQGE GHFSVDEKSR QVNLTERGLV
0281 LIEELLVKEG IMDEGESLYS PANIMLMHHV TAALRAHALF TRDVDYIVKD GEVIIVDEHT GRTMQGRRWS
0351 DGLHQAVEAK EGVQIQNENQ TLASITFQNY FRLYEKLAGM TGTADTEAFE FSSIYKLDTV VVPTNRPMIR
0421 KDLPDLVYMT EAEKIQAIIE DIKERTAKGQ PVLVGTISIE KSELVSNELT KAGIKHNVLN AKFHANEAAI
0491 VAQAGYPAAV TIATNMAGRG TDIVLGGSWQ AEVAALENPT AEQIEKIKAD WQVRHDAVLE AGGLHIIGTE
0561 RHESRRIDNQ LRGRSGRQGD AGSSRFYLSM EDALMRIFAS DRVSGMMRKL GMKPGEAIEH PWVTKAIANA
0631 QRKVESRNFD IRKQLLEYDD VANDQRRAIY SQRNELLDVS DVSETINSIR EDVFKATIDA YIPPQSLEEM
0701 WDIPGLQERL KNDFDLDLPI AEWLDKEPEL HEETLRERIL AQSIEVYQRK EEVVGAEMMR HFEKGVMLQT
0771 LDSLWKEHLA AMDYLRQGIH LRGYAQKDPK QEYKRESFSM FAAMLESLKY EVISTLSKVQ VRMPEEVEEL
0841 EQQRRMEAER LAQMQQLSHQ DDDSAAAAAL AAQTGERKVG RNDPCPCGSG KKYKQCHGRL Q
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Nucleotide
FASTA format
View sequence out neighbor 100bp
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-100 GCGCAAGGCA TCCGTGCTGG CCCTCAACGC
-070 CTCACCTAAC AACAATAAAC CTTTACTTCA TTTTATTAAC TCCGCAACGC GGGGCGTTTG AGATTTTATT
0001 atgctaatca aattgttaac taaagttttc ggtagtcgta acgatcgcac cctgcgccgg atgcgcaaag
0071 tggtcaacat catcaatgcc atggaaccgg agatggaaaa actctccgac gaagaactga aagggaaaac
0141 cgcagagttt cgtgcacgtc tggaaaaagg cgaagtgctg gaaaatctga tcccggaagc tttcgccgtg
0211 gtacgtgagg caagtaagcg cgtctttggt atgcgtcact tcgacgttca gttactcggc ggtatggttc
0281 ttaacgaacg ctgcatcgcc gaaatgcgta ccggtgaagg aaaaaccctg accgcaacgc tgcctgctta
0351 cctgaacgca ctaaccggta aaggcgtgca cgtagttacc gtcaacgact acctggcgca acgtgacgcc
0421 gaaaacaacc gtccgctgtt tgaattcctt ggcctgactg tcggtatcaa cctgccgggc atgccagcac
0491 cggcaaagcg cgaagcttac gcagctgaca tcacttacgg tacgaacaac gaatacggct ttgactacct
0561 gcgcgacaac atggcgttca gccctgaaga acgtgtacag cgtaaactgc actatgcgct ggtggacgaa
0631 gtggactcca tcctgatcga tgaagcgcgt acaccgctga tcatttccgg cccggcagaa gacagctcgg
0701 aaatgtataa acgcgtgaat aaaattattc cgcacctgat ccgtcaggaa aaagaagact ccgaaacctt
0771 ccagggcgaa ggccacttct cggtggacga aaaatctcgc caggtgaacc tgaccgaacg tggtctggtg
0841 ctgattgaag aactgctggt gaaagagggc atcatggatg aaggggagtc tctgtactct ccggccaaca
0911 tcatgctgat gcaccacgta acggcggcgc tgcgcgctca tgcgctgttt acccgtgacg tcgactacat
0981 cgttaaagat ggtgaagtta tcatcgttga cgaacacacc ggtcgtacca tgcagggccg tcgctggtcc
1051 gatggtctgc accaggctgt ggaagcgaaa gaaggtgtgc agatccagaa cgaaaaccaa acgctggctt
1121 cgatcacctt ccagaactac ttccgtctgt atgaaaaact ggcggggatg accggtactg ctgataccga
1191 agctttcgaa tttagctcaa tctacaagct ggataccgtc gttgttccga ccaaccgtcc aatgattcgt
1261 aaagatctgc cggacctggt ctacatgact gaagcggaaa aaattcaggc gatcattgaa gatatcaaag
1331 aacgtactgc gaaaggccag ccggtgctgg tgggtactat ctccatcgaa aaatcggagc tggtgtcaaa
1401 cgaactgacc aaagccggta ttaagcacaa cgtcctgaac gccaaattcc acgccaacga agcggcgatt
1471 gttgctcagg caggttatcc ggctgcggtg actatcgcga ccaatatggc gggtcgtggt acagatattg
1541 tgctcggtgg tagctggcag gcagaagttg ccgcgctgga aaatccgacc gcagagcaaa ttgaaaaaat
1611 taaagccgac tggcaggtac gtcacgatgc ggtactggaa gcaggtggcc tgcatatcat cggtaccgag
1681 cgtcacgaat cccgtcgtat cgataaccag ttgcgcggtc gttctggtcg tcagggggat gctggttctt
1751 cccgtttcta cctgtcgatg gaagatgcgc tgatgcgtat ttttgcttcc gaccgagtat ccggcatgat
1821 gcgtaaactg ggtatgaagc caggcgaagc cattgaacac ccgtgggtga ctaaagcgat tgccaacgcc
1891 cagcgtaaag ttgaaagccg taacttcgac attcgtaagc aactgctgga atatgatgac gtggctaacg
1961 atcagcgtcg cgccatttac tcccagcgta acgaactgtt ggatgtcagc gatgtgagcg aaaccattaa
2031 cagcattcgt gaagatgtgt tcaaagcgac cattgatgcc tacattccac cacagtcgct ggaagaaatg
2101 tgggatattc cggggctgca ggaacgtctg aagaacgatt tcgacctcga tttgccaatt gccgagtggc
2171 tggataaaga accagaactg catgaagaga cgctgcgtga gcgcattctg gcgcagtcca tcgaagtgta
2241 tcagcgtaaa gaagaagtgg ttggtgctga gatgatgcgt cacttcgaga aaggcgtcat gctgcaaacg
2311 cttgactccc tgtggaaaga gcacctggca gcgatggact atctgcgtca gggtatccac ctgcgtggct
2381 acgcacagaa agatccgaag caggaataca aacgtgaatc gttctccatg tttgcagcga tgctggagtc
2451 gttgaaatat gaagttatca gtacgctgag caaagttcag gtacgtatgc ctgaagaggt tgaggagctg
2521 gaacaacagc gtcgtatgga agccgagcgt ttagcgcaaa tgcagcagct tagccatcag gatgacgact
2591 ctgcagccgc agctgcactg gcggcgcaaa ccggagagcg caaagtagga cgtaacgatc cttgcccgtg
2661 cggttctggt aaaaaataca agcagtgcca tggccgcctg caataaAAGC TAACTGTTGA AGTAAAAGGC
2731 GCAGGATTCT GCGCCTTTTT TATAGGTTTA AGACAATGAA AAAGCTGCAA ATTGCGGTAG GTATTATTCG
2801 CAACGA
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