|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
murF
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
murF
Search strains by all related name:
murF b0086 ECK0087 JW0084 mra
|
General information (Go to Linear View: )
|
|
Gene Name
|
murF
|
|
Alternative name
|
b0086,ECK0087,JW0084,mra
|
|
Location, Length
|
94,650 - 96,008
(
+
)
;
2.04
min
;
1359
(bp) ,
452
(aa)
|
|
Product
|
UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D- alanine ligase
|
|
Note
|
ECK0087:JW0084:b0086
|
|
Function
|
|
|
PID
|
85674322
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
MURF_ECOLI
(
P11880
;
O07100; P77636
)
|
|
- Protein name
|
RecName: Full=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; EC=6.3.2.10; AltName: Full=UDP-MurNAc-pentapeptide synthetase; AltName: Full=D-alanyl-D-alanine-adding enzyme;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=murF; Synonyms=mra; OrderedLocusNames=b0086, JW0084;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
|
MMBR References
|
Nucleic Acids Res. 1989;17(13):5379
Nucleotide sequence of the murF gene encoding the UDP-MurNAc-pentapeptide synthetase of Escherichia coli.
Parquet C, Flouret B, Mengin-Lecreulx D, van Heijenoort J.
(
2668880
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MISVTLSQLT DILNGELQGA DITLDAVTTD TRKLTPGCLF VALKGERFDA HDFADQAKAG GAGALLVSRP
0071 LDIDLPQLIV KDTRLAFGEL AAWVRQQVPA RVVALTGSSG KTSVKEMTAA ILSQCGNTLY TAGNLNNDIG
0141 VPMTLLRLTP EYDYAVIELG ANHQGEIAWT VSLTRPEAAL VNNLAAAHLE GFGSLAGVAK AKGEIFSGLP
0211 ENGIAIMNAD NNDWLNWQSV IGSRKVWRFS PNAANSDFTA TNIHVTSHGT EFTLQTPTGS VDVLLPLPGR
0281 HNIANALAAA ALSMSVGATL DAIKAGLANL KAVPGRLFPI QLAENQLLLD DSYNANVGSM TAAVQVLAEM
0351 PGYRVLVVGD MAELGAESEA CHVQVGEAAK AAGIDRVLSV GKQSHAISTA SGVGEHFADK TALITRLKLL
0421 IAEQQVITIL VKGSRSAAME EVVRALQENG TC
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TGGTCGCGGG CAAAGGCCAT GAAGATTACC
-070 AGATTGTTGG CAATCAGCGT CTGGACTACT CCGATCGCGT CACGGTGGCG CGTCTGCTGG GGGTGATTGC
0001 atgattagcg taacccttag ccaacttacc gacattctca acggtgaact gcaaggtgca gatatcaccc
0071 ttgatgctgt aaccactgat acccgaaaac tgacgccggg ctgcctgttt gttgccctga aaggcgaacg
0141 ttttgatgcc cacgattttg ccgaccaggc gaaagctggc ggcgcaggcg cactactggt tagccgtccg
0211 ctggacatcg acctgccgca gttaatcgtc aaggatacgc gtctggcgtt tggtgaactg gctgcatggg
0281 ttcgccagca agttccggcg cgcgtggttg ctctgacggg gtcctccggc aaaacctccg ttaaagagat
0351 gacggcggcg attttaagcc agtgcggcaa cacgctttat acggcaggca atctcaacaa cgacatcggt
0421 gtaccgatga cgctgttgcg cttaacgccg gaatacgatt acgcagttat tgaacttggc gcgaaccatc
0491 agggcgaaat agcctggact gtgagtctga ctcgcccgga agctgcgctg gtcaacaacc tggcagcggc
0561 gcatctggaa ggttttggct cgcttgcggg tgtcgcgaaa gcgaaaggtg aaatctttag cggcctgccg
0631 gaaaacggta tcgccattat gaacgccgac aacaacgact ggctgaactg gcagagcgta attggctcac
0701 gcaaagtgtg gcgtttctca cccaatgccg ccaacagcga tttcaccgcc accaatatcc atgtgacctc
0771 gcacggtacg gaatttaccc tacaaacccc aaccggtagc gtcgatgttc tgctgccgtt gccggggcgt
0841 cacaatattg cgaatgcgct ggcagccgct gcgctctcca tgtccgtggg cgcaacgctt gatgctatca
0911 aagcggggct ggcaaatctg aaagctgttc caggccgtct gttccccatc caactggcag aaaaccagtt
0981 gctgctcgac gactcctaca acgccaatgt cggttcaatg actgcagcag tccaggtact ggctgaaatg
1051 ccgggctacc gcgtgctggt ggtgggcgat atggcggaac tgggcgctga aagcgaagcc tgccatgtac
1121 aggtgggcga ggcggcaaaa gctgctggta ttgaccgcgt gttaagcgtg ggtaaacaaa gccatgctat
1191 cagcaccgcc agcggcgttg gcgaacattt tgctgataaa actgcgttaa ttacgcgtct taaattactg
1261 attgctgagc aacaggtaat tacgatttta gttaagggtt cacgtagtgc cgccatggaa gaggtagtac
1331 gcgctttaca ggagaatggg acatgttagT TTGGCTGGCC GAACATTTGG TCAAATATTA TTCCGGCTTT
1401 AACGTCTTTT CCTATCTGAC GTTTCGCGCC ATCGTCAGCC TGCTGACCGC GCTGTTCAT
|
