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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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|
|
Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
abrB
|
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Related strains
|
|
Strains Search
|
Search strains by gene name:
abrB
Search strains by all related name:
abrB b0715 ECK0704 JW5097 ybgN
|
General information (Go to Linear View: )
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|
Gene Name
|
abrB
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|
Alternative name
|
b0715,ECK0704,JW5097,ybgN
|
|
Location, Length
|
747,145 - 748,191
(
-
)
;
16.08
min
;
1047
(bp) ,
348
(aa)
|
|
Product
|
predicted regulator
|
|
Note
|
ECK0704:JW5097:b0715
|
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Function
|
|
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PID
|
85674745
|
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
ABRB_ECOLI
(
P75747
)
|
|
- Protein name
|
RecName: Full=Protein abrB; AltName: Full=AidB regulator;
|
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- Synonyms
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- Gene name
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ORFNames=ECK0704;
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Homology Analysis
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BLAST
|
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Bacteria
|
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GTOP
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PDB
|
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PSI-BLAST
|
|
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SWISS-PROT
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|
BLAST
|
|
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PSI-BLAST
|
|
|
nr
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BLAST
|
predicted regulator [Escherichia coli str. K-12 substr. W3110]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MPVLQWGMLC VLSLLLSIGF LAVHLPAALL LGPMIAGIIF SMRGITLQLP RSAFLAAQAI LGCMIAQNLT
0071 GSILTTLAVN WPIVLAILLV TLLSSAIVGW LLVRYSSLPG NTGAWGSSPG GAAAMVAMAQ DYGADIRLVA
0141 FMQYLRVLFV AGAAVLVTRM MLGDNAEAVN QHIVWFPPVS INLLLTILLA VVAGTVGCLL RLPSGTMLIP
0211 MLAGAVLQSG QLITIELPEW LLAMAYMAIG WRIGLGFDKQ ILLRALRPLP QILLSIFALL AICAGMAWGL
0281 TRFMHIDFMT AYLATSPGGL DTVAVIAAGS NADMALIMAM QTLRLFSILL TGPAIARFIS TYAPKRSA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ctgattttcc ccttttcctt gattgctgtt
-070 attttttcct ggcccagctt tctttatgct gtatcgatac accaaagaga aaataatgag ggagcgaagg
0001 atgccagttt tgcagtgggg aatgttatgt gtgctatcac ttctcctttc tattggtttc ctcgcggtac
0071 atctcccggc ggcgctatta cttgggccga tgatcgccgg gatcatcttt agtatgcgcg gaattactct
0141 gcaacttccc cgctctgctt ttctcgccgc ccaggccatt cttggctgca tgattgcgca aaacctcact
0211 ggttcgattc tcaccaccct ggccgtcaac tggccgatcg tgcttgcaat tttactggta acgctgcttt
0281 ccagcgccat tgtgggttgg ttattggtgc gctatagctc attgcctgga aataccggtg cctggggctc
0351 ctctcctggc ggcgcggcgg caatggtcgc tatggcgcaa gattacggcg cagatattcg cctggtggcg
0421 tttatgcaat atctgcgagt gctgttcgtc gcgggggccg ctgttctggt cacccgcatg atgctgggcg
0491 ataacgctga agcggttaac cagcatatcg tctggttccc gccagtgagc attaatctcc tgcttactat
0561 tttgctcgcg gtcgttgccg gtacagtggg atgcctgctg cgtcttcctt ccggcacgat gctcatcccg
0631 atgctggcgg gcgcagtgct ccagtctggt cagctcatca ccatcgaact accggaatgg ctgctggcga
0701 tggcgtatat ggcaattggc tggcggattg gtcttggttt cgataaacaa atcttactgc gggcactacg
0771 cccgctaccg caaatcctgc tgtcgatttt tgctctgctg gctatttgtg cgggtatggc gtgggggctg
0841 acccggttta tgcacattga ttttatgact gcctacctcg ccaccagccc cggcgggctt gataccgtgg
0911 cggtcatcgc cgcagggagc aatgccgata tggcgctcat tatggcgatg caaaccctac gcctgttcag
0981 tattttgctg acagggcctg ccattgcgcg gtttatttca acctatgcgc cgaagcggtc ggcctagtgc
1051 tggcagccag ggcaccagta aaacgggcga gatgacagcg tggttttctc aatgatgctg ccacaacgtt
1121 cgcacggttc gccatctcga tgaaaaa
|
