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PEC Original Annotations
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Essentiality
|
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
|
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Gene Search
|
Search MG1655 PEC by gene name:
ybeH
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
ybeH
Search strains by all related name:
ybeH b0625 b0626 b4581 ECK0618 JW0620 o187 ybeM ybeM_1
|
General information (Go to Linear View: )
|
|
Gene Name
|
ybeH
|
|
Alternative name
|
b0625,b0626,b4581,ECK0618,JW0620,o187,ybeM,ybeM_1
|
|
Location, Length
|
658,453 - 658,680
(
+
)
;
14.17
min
;
228
(bp) ,
75
(aa)
|
|
Product
|
hypothetical protein
|
|
Note
|
ECK0618:JW0620:b0625
|
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Function
|
|
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PID
|
4062248
|
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YBEM_ECOLI
(
P39874
;
P77104; P77192
)
|
|
- Protein name
|
RecName: Full=Putative UPF0012 hydrolase ybeM; EC=3.5.-.-;
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- Synonyms
|
|
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- Gene name
|
ORFNames=b0625, b0626;
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Homology Analysis
|
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BLAST
|
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Bacteria
|
|
GTOP
|
|
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PDB
|
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PSI-BLAST
|
|
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SWISS-PROT
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BLAST
|
|
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PSI-BLAST
|
|
|
nr
|
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BLAST
|
hypothetical protein [Escherichia coli str. K-12 substr. W3110]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MLVAAGQFAV TSVWEKNAEI CASLMAQAAE NDASLFALPE ALLARDDHDA DLSVKSAQLL EGEFLGLYGE
0071 KVNVT
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TGTAACACTG CAAAATCCTG CTATTTGATT
-070 TGTATGAGTG ATAAGTGTAA CGCCGAATAA TCGTCGTTGG CGAATTTTAC GACTCTGACA GGAGGTGGCA
0001 atgctggttg ccgcaggaca gtttgctgtt acatctgtgt gggaaaagaa cgctgagatt tgtgcctcgt
0071 tgatggcgca ggcggcggaa aacgacgcat cgctgtttgc cctgccggaa gcattgctgg cgcgcgatga
0141 tcatgatgca gatctatcgg ttaaatcagc acagctgctg gaaggcgaat tcctcggact ttacggcgag
0211 aaagtaaacg taacatgaTG ACGACAATTC TGACGATTCA TGTTCCTTCA ACGCCGGGGC GCGCATGGAA
0281 TATGCTGGTG GCACTTCAGG CAGGAAACAT CGTCGCCCGT TATGCCAA
|
