|
PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
borD
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
borD
Search strains by all related name:
borD b0557 ECK0549 iss JW0546 ybcU
|
General information (Go to Linear View: )
|
|
Gene Name
|
borD
|
|
Alternative name
|
b0557,ECK0549,iss,JW0546,ybcU
|
|
Location, Length
|
577,823 - 578,116
(
-
)
;
12.44
min
;
294
(bp) ,
97
(aa)
|
|
Product
|
predicted lipoprotein
|
|
Note
|
DLP12 prophage region; ECK0549:JW0546:b0557
|
|
Function
|
|
|
PID
|
85674693
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
BORD_ECOLI
(
P77330
;
Q2MBM3
)
|
|
- Protein name
|
RecName: Full=Lipoprotein bor homolog from lambdoid prophage DLP12; Flags: Precursor;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=borD; Synonyms=ybcU; OrderedLocusNames=b0557, JW0546;
|
|
Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
DLP12 prophage; predicted lipoprotein [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MKKMLLATAL ALLITGCAQQ TFTVQNKQTA VAPKETITHH FFVSGIGQKK TVDAAKICGG AENVVKTETQ
0071 QTFVNGLLGF ITLGIYTPLE ARVYCSK
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 taaatattaa caatatgaaa tttcaactca
-070 ttgtttaggg tttgtttaat tttctacaca tacgattctg cgaacttcaa aaagcatcgg gaataacacc
0001 atgaaaaaaa tgctactcgc tactgcgctg gccctgctta ttacaggatg tgctcaacag acatttactg
0071 ttcaaaacaa acagacagca gtagcaccaa aggaaaccat cacccatcat ttcttcgttt ctggaattgg
0141 gcagaagaaa actgtcgatg cagctaaaat ttgtggcggc gcagaaaatg ttgttaaaac agaaacccag
0211 caaacattcg taaatggatt gctcggtttt attactttag gcatttatac tccgctggaa gcgcgtgtgt
0281 attgctcaaa ataattgcat gagttgccca tcgatatggt cagctctatc tgcactgctc attaatatac
0351 ttctgggttc cttccagttg tttttgcata gtgatcagcc tctc
|
