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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
adiA
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Related strains
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Strains Search
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Search strains by gene name:
adiA
Search strains by all related name:
adiA adi b4117 ECK4110 JW5731
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General information (Go to Linear View: )
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Gene Name
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adiA
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Alternative name
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adi,b4117,ECK4110,JW5731
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Location, Length
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4,342,932 - 4,345,202
(
-
)
;
93.47
min
;
2271
(bp) ,
756
(aa)
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Product
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biodegradative arginine decarboxylase
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Note
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ECK4110:JW5731:b4117
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Function
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PID
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85676869
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
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ADIA_ECOLI
(
P28629
;
P78138; Q2M6I7
)
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- Protein name
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RecName: Full=Biodegradative arginine decarboxylase; Short=ADC; EC=4.1.1.19;
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- Synonyms
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- Gene name
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Name=adiA; Synonyms=adi; OrderedLocusNames=b4117, JW5731;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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PSI-BLAST
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nr
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BLAST
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biodegradative arginine decarboxylase [Escherichia coli str. K-12 substr. W3110]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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MMBR References
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Microbiology 1996;142:1311-1320
Molecular characterization of adiY, a regulatory gene which affects expression of the biodegradative acid-induced arginine decarboxylase gene (adiA) of Escherichia coli.
Stim-Herndon, K. P., T. M. Flores, and G. N. Bennett.
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| Sequences |
Amino acid
FASTA format
|
0001 MMKVLIVESE FLHQDTWVGN AVERLADALS QQNVTVIKST SFDDGFAILS SNEAIDCLMF SYQMEHPDEH
0071 QNVRQLIGKL HERQQNVPVF LLGDREKALA AMDRDLLELV DEFAWILEDT ADFIAGRAVA AMTRYRQQLL
0141 PPLFSALMKY SDIHEYSWAA PGHQGGVGFT KTPAGRFYHD YYGENLFRTD MGIERTSLGS LLDHTGAFGE
0211 SEKYAARVFG ADRSWSVVVG TSGSNRTIMQ ACMTDNDVVV VDRNCHKSIE QGLMLTGAKP VYMVPSRNRY
0281 GIIGPIYPQE MQPETLQKKI SESPLTKDKA GQKPSYCVVT NCTYDGVCYN AKEAQDLLEK TSDRLHFDEA
0351 WYGYARFNPI YADHYAMRGE PGDHNGPTVF ATHSTHKLLN ALSQASYIHV REGRGAINFS RFNQAYMMHA
0421 TTSPLYAICA SNDVAVSMMD GNSGLSLTQE VIDEAVDFRQ AMARLYKEFT ADGSWFFKPW NKEVVTDPQT
0491 GKTYDFADAP TKLLTTVQDC WVMHPGESWH GFKDIPDNWS MLDPIKVSIL APGMGEDGEL EETGVPAALV
0561 TAWLGRHGIV PTRTTDFQIM FLFSMGVTRG KWGTLVNTLC SFKRHYDANT PLAQVMPELV EQYPDTYANM
0631 GIHDLGDTMF AWLKENNPGA RLNEAYSGLP VAEVTPREAY NAIVDNNVEL VSIENLPGRI AANSVIPYPP
0701 GIPMLLSGEN FGDKNSPQVS YLRSLQSWDH HFPGFEHETE GTEIIDGIYH VMCVKA
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ctaaatattt caaaaatgtt tgtttttcac
-070 gcgctttaca gcccgaaaag gccggaagat acttgcccgc aacgaagatt ccttcataac cgggtaagca
0001 atgatgaaag tattaattgt tgaaagcgag tttctccatc aagacacctg ggtcggtaac gccgttgagc
0071 gtctggcaga tgctttaagc cagcaaaatg ttaccgtgat taaatccacc tcctttgatg atggttttgc
0141 cattctctct tcaaacgaag ccattgactg cctgatgttc agctatcaaa tggaacatcc ggacgaacat
0211 caaaacgtca gacaattgat cggtaagctt catgagcgcc aacaaaacgt gccggtcttc ctgttgggcg
0281 atcgggaaaa agccctcgcc gcaatggatc gcgacctgct ggagcttgtc gatgaattcg cctggattct
0351 ggaagatacc gccgacttta tcgccggacg cgccgttgcc gcgatgaccc gctaccgcca gcagctgttg
0421 ccgccactgt tcagcgcgct gatgaaatat agtgacatcc atgaatattc ctgggcagcg ccaggccacc
0491 agggcggcgt tggttttacc aaaacacccg ccggacgttt ctaccatgac tactatggtg aaaatctgtt
0561 ccgcaccgac atgggcatcg aacgaacttc cctcggttct ttgcttgacc atactggcgc atttggcgaa
0631 agcgaaaaat atgccgcacg cgtatttggt gccgatcgct cctggtcggt agtcgtcggt acttccggct
0701 ctaaccgcac catcatgcag gcttgcatga ccgataacga tgtcgtggtc gttgaccgta actgccataa
0771 atccatcgaa caaggtttga tgctgacagg cgcgaaaccg gtctatatgg tgccaagccg caaccgctac
0841 ggcattatcg ggccaatcta tccgcaggaa atgcaacctg aaaccttgca gaagaaaatc agtgaaagcc
0911 cgctgaccaa agacaaagcc gggcaaaaac cgtcttactg cgtggtgacc aactgcacct atgacggcgt
0981 gtgttataac gctaaagaag cgcaggatct gctggaaaaa acctccgatc gtctgcactt tgacgaagcc
1051 tggtacggct atgcacgttt caacccgatc tatgccgatc actatgccat gcgcggcgaa cctggcgatc
1121 acaacggtcc taccgttttc gccacccact ccacccacaa actgctgaat gcgctgtcac aggcttctta
1191 tattcatgta cgtgaaggtc gtggggcgat taacttctcc cgcttcaacc aggcctacat gatgcatgcc
1261 accacctccc cgctgtatgc catctgcgca tccaacgacg tggcggtgtc gatgatggac ggcaacagcg
1331 gcctgtcact gacacaggaa gtgattgacg aagcggttga tttccgtcag gcgatggcgc ggctatataa
1401 agagttcacc gctgacggta gctggttctt caaaccgtgg aacaaagaag tcgtcaccga cccacaaacc
1471 ggcaaaacct atgactttgc tgacgcacca accaaactgc tgaccaccgt tcaggactgc tgggtaatgc
1541 atccgggcga aagctggcac ggcttcaaag atattccgga taactggagt atgctcgacc cgattaaagt
1611 cagcatcctt gctccgggaa tgggtgaaga tggtgaactg gaagaaaccg gtgttccggc ggcgctggtc
1681 actgcctggc ttggtcgcca cggcattgta cctacccgca ccactgactt ccaaattatg ttcctgttct
1751 ctatgggcgt aacccgtggg aaatggggaa ctctggttaa caccctttgc tccttcaaac gccactatga
1821 cgccaacaca ccgctggcgc aggtgatgcc ggaacttgtt gaacaatatc ctgacactta cgcgaacatg
1891 gggattcacg atctgggtga caccatgttt gcctggctga aagaaaacaa ccctggcgca cggttgaacg
1961 aagcctattc cggcctgccg gtggcggaag tcaccccgcg tgaagcgtac aacgcgattg tcgacaacaa
2031 tgtcgaactg gtatccattg aaaatctgcc aggacgcatc gcggcaaact cagttatccc gtatccgcca
2101 ggaatcccga tgctgctgtc tggtgaaaac ttcggcgata aaaacagtcc gcaagtaagt tatttacgct
2171 cgctgcaatc ctgggaccac catttccctg gatttgaaca cgaaactgaa gggactgaaa ttattgacgg
2241 tatttaccac gttatgtgcg tgaaagcgta accactattc cgctgaaggc gtaattgttt aaataacatt
2311 acgccgcctg gccttaggcc ttttgagtat ggcaacgttt tcataaaaat tgctgcaaac a
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