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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
basS
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Related strains
|
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Strains Search
|
Search strains by gene name:
basS
Search strains by all related name:
basS b4112 ECK4105 JW4073 pmrB
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General information (Go to Linear View: )
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Gene Name
|
basS
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Alternative name
|
b4112,ECK4105,JW4073,pmrB
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|
Location, Length
|
4,336,859 - 4,337,950
(
-
)
;
93.34
min
;
1092
(bp) ,
363
(aa)
|
|
Product
|
sensory histidine kinase in two-component regulatory system with BasR
|
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Note
|
ECK4105:JW4073:b4112
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Function
|
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PID
|
85676864
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
BASS_ECOLI
(
P30844
;
Q2M6J2
)
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- Protein name
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RecName: Full=Sensor protein basS; EC=2.7.13.3;
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- Synonyms
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- Gene name
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Name=basS; Synonyms=pmrB; OrderedLocusNames=b4112, JW4073;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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PSI-BLAST
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|
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nr
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BLAST
|
sensory histidine kinase in two-component regulatory system with BasR [Escherichia coli str. K-12 substr. MG1655]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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MMBR References
|
J. Biochem. (Tokyo) 1993;114:350-357
Novel members of the two-component signal transduction genes in Escherichia coli.
Nagasawa, S., K. Ishige, and T. Mizuno.
|
| Sequences |
Amino acid
FASTA format
|
0001 MHFLRRPISL RQRLILTIGA ILLVFELISV FWLWHESTEQ IQLFEQALRD NRNNDRHIMR EIREAVASLI
0071 VPGVFMVSLT LFICYQAVRR ITRPLAELQK ELEARTADNL TPIAIHSATL EIEAVVSALN DLVSRLTSTL
0141 DNERLFTADV AHELRTPLAG VRLHLELLAK THHIDVAPLV ARLDQMMESV SQLLQLARAG QSFSSGNYQH
0211 VKLLEDVILP SYDELSTMLD QRQQTLLLPE SAADITVQGD ATLLRMLLRN LVENAHRYSP QGSNIMIKLQ
0281 EDDGAVMAVE DEGPGIDESK CGELSKAFVR MDSRYGGIGL GLSIVSRITQ LHHGQFFLQN RQETSGTRAW
0351 VRLKKDQYVA NQI
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tatccacaat ctgcgcgaca aagtgggcaa
-070 agcccgtatc cgcaccgtgc gcggctttgg ctatatgctg gtcgcgaatg aggaaaacta attgaatctg
0001 atgcattttc tgcgccgacc aatatcgctg cgccaacggc tgatattgac catcggggcc attttgttgg
0071 tgtttgagct gatcagcgtc ttctggctat ggcatgaaag taccgagcag attcagctgt ttgagcaggc
0141 gctacgcgac aatcgcaaca acgatcgcca catcatgcgt gagatccgcg aggcggtcgc cagcctgatt
0211 gtccccggcg tctttatggt cagcctgacg ctatttatct gctatcaggc ggtacgccgc atcacccgcc
0281 cgctggcgga gctgcaaaaa gagctggaag cgcgcaccgc cgacaactta acgcccattg ccattcacag
0351 cgccaccctc gaaatcgaag cggtggtttc ggcgttaaac gatctggtca gtcgcctgac cagcacgctg
0421 gataacgaaa ggttgtttac cgctgacgtc gcgcacgaac tgcgaacgcc actggcgggg gtgcgtttgc
0491 atctggaact gctggcgaaa acgcatcaca ttgatgtagc accgttagtg gcacggcttg atcagatgat
0561 ggagagcgtc tcccagctgc tgcaactggc gcgtgccgga cagtcatttt cttccggtaa ttatcaacat
0631 gtaaaactgc tggaagatgt cattctcccc tcgtatgacg aactcagtac catgctcgac cagcgacagc
0701 aaaccctgct attgccagag agcgccgccg acatcaccgt tcagggtgat gcaaccctgc tgcggatgtt
0771 attgcgaaac ctggtagaaa acgcccatcg ttacagcccg caaggcagca acattatgat taagctgcaa
0841 gaagatgacg gagcggtcat ggcagttgaa gatgaaggac caggtattga tgagagtaaa tgcggggagt
0911 tgagtaaagc gtttgtacgt atggacagcc gttatggcgg gattggtctg gggttaagta ttgtcagccg
0981 cattacacag ttgcatcacg ggcagttttt cctgcaaaac cggcaagaga cttccggcac gcgggcctgg
1051 gtacggctga agaaagatca gtacgtggca aaccagatat aaagaaagct gctgaccacc agcacgctga
1121 acacggtagt taaactttca taaacacggt ttttcattgc actctcctcc gttaacctgg aggagagtat
1191 gc
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