|
PEC Original Annotations
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|
Essentiality
|
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Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
bfd
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
bfd
Search strains by all related name:
bfd b3337 ECK3324 JW3299 yheA
|
General information (Go to Linear View: )
|
|
Gene Name
|
bfd
|
|
Alternative name
|
b3337,ECK3324,JW3299,yheA
|
|
Location, Length
|
4,173,425 - 4,173,619
(
+
)
;
89.82
min
;
195
(bp) ,
64
(aa)
|
|
Product
|
bacterioferritin-associated ferredoxin
|
|
Note
|
ECK3324:JW3299:b3337
|
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Function
|
|
|
PID
|
85676704
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
BFD_ECOLI
(
P0AE56
;
O68930; P13655; Q2M702
)
|
|
- Protein name
|
RecName: Full=Bacterioferritin-associated ferredoxin;
|
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- Synonyms
|
|
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- Gene name
|
Name=bfd; Synonyms=yheA; OrderedLocusNames=b3337, JW3299;
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Homology Analysis
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BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
bacterioferritin-associated ferredoxin [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
|
MMBR References
|
Biochemistry. 1996;35(20):6297-301.
A [2Fe-2S] protein encoded by an open reading frame upstream of the Escherichia coli bacterioferritin gene.
Garg RP, Vargo CJ, Cui X, Kurtz DM Jr.
(
8639572
)
|
| Sequences |
Amino acid
FASTA format
|
0001 MYVCLCNGIS DKKIRQAVRQ FSPHSFQQLK KFIPVGNQCG KCVRAAREVM EDELMQLPEF KESA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TTTTATTCAT ATTTCTATTC TTTGCTTAAA
-070 AAAGAGTCTT TCCGTAATTG AAATAAGAAC TATTTTCATT TATTTTTGAA GAAAGTATAC GGGAGTCTCT
0001 atgtacgttt gtctttgtaa tggtatcagc gataaaaaaa ttcgtcaggc tgtgcgccag ttttcccctc
0071 actcgttcca gcaattaaaa aaatttattc cggtcggcaa tcagtgcggt aaatgtgtcc gggccgcgcg
0141 tgaagtgatg gaggatgaat taatgcagct gccggagttt aaggagtccg cataaACGGA GTGTGTTTTT
0211 TGACTTACTC GTAAGCCGTT CTACTCTTCA AAGAGTGGAA GCGAAGGAGT CAAAAAATGA AAGGTGATAC
0281 TAAAGTTATA AATTA
|
