|
PEC Original Annotations
|
|
Essentiality
|
|
Class
|
essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
glyS
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
glyS
Search strains by all related name:
glyS b3559 ECK3547 gly-act glyS JW3530
|
General information (Go to Linear View: )
|
|
Gene Name
|
glyS
|
|
Alternative name
|
b3559,ECK3547,gly-act,glyS,JW3530
|
|
Location, Length
|
3,916,018 - 3,918,087
(
+
)
;
84.28
min
;
2070
(bp) ,
689
(aa)
|
|
Product
|
glycine tRNA synthetase, beta subunit
|
|
Note
|
ECK3547:JW3530:b3559
|
|
Function
|
|
|
PID
|
85676485
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
SYGB_ECOLI
(
P00961
;
Q2M7M1
)
|
|
- Protein name
|
RecName: Full=Glycyl-tRNA synthetase beta subunit; EC=6.1.1.14; AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS;
|
|
- Synonyms
|
|
|
- Gene name
|
Name=glyS; Synonyms=glyS(B); OrderedLocusNames=b3559, JW3530;
|
|
MMBR References
|
EMBO J. 1984;3:611-616
Molecular cloning, DNA structure and expression of the Escherichia coli D-xylose isomerase.
Briggs, K. A., W. E. Lancashire, and B. S. Hartley.
|
| Sequences |
Amino acid
FASTA format
|
0001 MSEKTFLVEI GTEELPPKAL RSLAESFAAN FTAELDNAGL AHGTVQWFAA PRRLALKVAN LAEAQPDREI
0071 EKRGPAIAQA FDAEGKPSKA AEGWARGCGI TVDQAERLTT DKGEWLLYRA HVKGESTEAL LPNMVATSLA
0141 KLPIPKLMRW GASDVHFVRP VHTVTLLLGD KVIPATILGI QSDRVIRGHR FMGEPEFTID NADQYPEILR
0211 ERGKVIADYE ERKAKIKADA EEAARKIGGN ADLSESLLEE VASLVEWPVV LTAKFEEKFL AVPAEALVYT
0281 MKGDQKYFPV YANDGKLLPN FIFVANIESK DPQQIISGNE KVVRPRLADA EFFFNTDRKK RLEDNLPRLQ
0351 TVLFQQQLGT LRDKTDRIQA LAGWIAEQIG ADVNHATRAG LLSKCDLMTN MVFEFTDTQG VMGMHYARHD
0421 GEAEDVAVAL NEQYQPRFAG DDLPSNPVAC ALAIADKMDT LAGIFGIGQH PKGDKDPFAL RRAALGVLRI
0491 IVEKNLNLDL QTLTEEAVRL YGDKLTNANV VDDVIDFMLG RFRAWYQDEG YTVDTIQAVL ARRPTRPADF
0561 DARMKAVSHF RTLDAAAALA AANKRVSNIL AKSDEVLSDR VNASTLKEPE EIKLAMQVVV LRDKLEPYFT
0631 EGRYQDALVE LAELREPVDA FFDKVMVMVD DKELRINRLT MLEKLRELFL RVADISLLQ
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 GCGCATTCGC ACCCTGACCA AAGCAGTGGC
-070 AGAAGCATAC TACGCTTCCC GTGAAGCCCT CGGCTTCCCG ATGTGCAACA AAGATAAGTA AGAGGCGGCT
0001 atgtctgaga aaacttttct ggtggaaatc ggcactgaag agctgccacc aaaagcactg cgcagcctgg
0071 ctgagtcctt tgctgcgaac tttactgcgg agctggataa cgctggcctc gcacacggca ccgttcaatg
0141 gtttgctgct ccgcgtcgtc tggcgctgaa agtagctaac ctggcggaag cgcaaccgga tcgtgaaatc
0211 gaaaaacgcg gcccggcgat tgcccaggcg ttcgacgctg aaggcaaacc gagcaaagcg gcagaaggtt
0281 gggcgcgtgg ttgcggtatt accgttgacc aggctgagcg tctgactacc gataaaggcg aatggctgct
0351 gtatcgcgcc catgtgaagg gcgaaagcac cgaagcactg ctgccgaata tggttgcgac ttctctggcg
0421 aaactgccga tcccgaaact gatgcgttgg ggcgcaagcg acgtgcactt cgtgcgtccg gtgcacaccg
0491 tgaccctgct gctgggcgac aaagtcattc cggcaaccat tctgggcatt cagtccgatc gcgtgattcg
0561 cggccaccgc tttatgggcg agccggaatt caccatcgat aacgccgatc agtatccgga aattctgcgt
0631 gagcgtggga aagtcatcgc cgattacgaa gaacgtaagg cgaagattaa agccgatgcc gaagaagcag
0701 cgcgtaagat tggcggtaac gctgacttaa gcgaaagcct gctggaagaa gtggcttcgc tggtggagtg
0771 gccggtcgtt ctgaccgcaa aattcgaaga gaaattcctc gcggtgccgg ctgaagcgct ggtttacacc
0841 atgaaaggtg accagaaata cttcccggtg tatgcgaacg acggcaaact gctgccgaac tttatcttcg
0911 ttgccaacat cgaatcgaaa gatccgcagc agattatctc cggtaacgag aaagtcgttc gtccgcgtct
0981 ggcggatgcc gagttcttct tcaacaccga ccgtaaaaaa cgtcttgaag ataacctgcc gcgcctgcaa
1051 accgtgttgt tccagcaaca gttggggacg ctgcgcgaca aaactgaccg catccaggcg ctggctggct
1121 ggattgctga acagattggc gctgacgtta accacgctac ccgtgcgggt ctgctgtcta agtgcgacct
1191 gatgaccaac atggtcttcg agttcaccga cacccagggc gttatgggga tgcactatgc gcgtcacgat
1261 ggcgaagcgg aagatgtcgc ggtggcgctg aatgagcagt atcagccgcg ttttgctggt gatgacctgc
1331 cgtccaaccc agtagcttgt gcgctggcga ttgctgacaa gatggatacc ctggcgggta tcttcggtat
1401 cggtcagcat ccgaaaggcg acaaagaccc gtttgcgctg cgtcgtgccg cgcttggcgt gctgcgaatt
1471 atcgttgaga agaacctcaa ccttgatctg caaacgctga ccgaagaagc ggtgcgtctg tatggcgata
1541 agctgactaa tgccaacgta gttgatgatg ttatcgactt tatgctcggt cgcttccgcg cctggtatca
1611 ggacgaaggt tataccgttg acaccatcca ggcggtactg gcgcgtcgtc cgactcgtcc ggctgatttc
1681 gatgcccgta tgaaagcggt atcgcatttc cgtaccctgg atgcagctgc tgcactggcg gcggcgaaca
1751 aacgtgtatc taacattctg gcgaaatctg acgaagtgct gagcgaccgc gtgaatgcct ctaccctgaa
1821 agagccggaa gaaattaaac tggcgatgca ggttgtggtg ctacgtgaca agctggagcc gtactttacg
1891 gaaggtcgtt accaggatgc gctggtcgaa ctggctgagc tgcgtgaacc ggttgatgct ttcttcgata
1961 aagtgatggt catggttgat gacaaagaat tgcgtatcaa ccgtctgacc atgctggaga aactgcgcga
2031 actgttcctg cgcgttgcgg atatttcgct gttgcaataa TAACGCCGTT ATTAAATAGC CTGCCATCTG
2101 GCAGGCTTTT TTTATCGCTA AATAATACAG CAACCTTTAA TAATCTTCTG CTGAATAAAG ATTATCTCAT
|
