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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
xylB
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Related strains
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Strains Search
|
Search strains by gene name:
xylB
Search strains by all related name:
xylB b3564 ECK3553 JW3536
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General information (Go to Linear View: )
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Gene Name
|
xylB
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Alternative name
|
b3564,ECK3553,JW3536
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|
Location, Length
|
3,911,044 - 3,912,498
(
+
)
;
84.17
min
;
1455
(bp) ,
484
(aa)
|
|
Product
|
xylulokinase
|
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Note
|
ECK3553:JW3536:b3564
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Function
|
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PID
|
85676479
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
XYLB_ECOLI
(
P09099
;
Q2M7M7
)
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- Protein name
|
RecName: Full=Xylulose kinase; Short=Xylulokinase; EC=2.7.1.17;
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- Synonyms
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- Gene name
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Name=xylB; OrderedLocusNames=b3564, JW3536;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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PSI-BLAST
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|
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nr
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BLAST
|
xylulokinase [Escherichia coli str. K-12 substr. MG1655]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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MMBR References
|
EMBO J. 1984;3:611-616
Molecular cloning, DNA structure and expression of the Escherichia coli D-xylose isomerase.
Briggs, K. A., W. E. Lancashire, and B. S. Hartley.
|
| Sequences |
Amino acid
FASTA format
|
0001 MYIGIDLGTS GVKVILLNEQ GEVVAAQTEK LTVSRPHPLW SEQDPEQWWQ ATDRAMKALG DQHSLQDVKA
0071 LGIAGQMHGA TLLDAQQRVL RPAILWNDGR CAQECTLLEA RVPQSRVITG NLMMPGFTAP KLLWVQRHEP
0141 EIFRQIDKVL LPKDYLRLRM TGEFASDMSD AAGTMWLDVA KRDWSDVMLQ ACDLSRDQMP ALYEGSEITG
0211 ALLPEVAKAW GMATVPVVAG GGDNAAGAVG VGMVDANQAM LSLGTSGVYF AVSEGFLSKP ESAVHSFCHA
0281 LPQRWHLMSV MLSAASCLDW AAKLTGLSNV PALIAAAQQA DESAEPVWFL PYLSGERTPH NNPQAKGVFF
0351 GLTHQHGPNE LARAVLEGVG YALADGMDVV HACGIKPQSV TLIGGGARSE YWRQMLADIS GQQLDYRTGG
0421 DVGPALGAAR LAQIAANPEK SLIELLPQLP LEQSHLPDAQ RYAAYQPRRE TFRRLYQQLL PLMA
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TGGTAAACCA TTATCTGTTC GACAAATAAC
-070 GGCTAACTGT GCAGTCCGTT GGCCCGGTTA TCGGTAGCGA TACCGGGCAT TTTTTTAAGG AACGATCGAT
0001 atgtatatcg ggatagatct tggcacctcg ggcgtaaaag ttattttgct caacgagcag ggtgaggtgg
0071 ttgctgcgca aacggaaaag ctgaccgttt cgcgcccgca tccactctgg tcggaacaag acccggaaca
0141 gtggtggcag gcaactgatc gcgcaatgaa agctctgggc gatcagcatt ctctgcagga cgttaaagca
0211 ttgggtattg ccggccagat gcacggagca accttgctgg atgctcagca acgggtgtta cgccctgcca
0281 ttttgtggaa cgacgggcgc tgtgcgcaag agtgcacttt gctggaagcg cgagttccgc aatcgcgggt
0351 gattaccggc aacctgatga tgcccggatt tactgcgcct aaattgctat gggttcagcg gcatgagccg
0421 gagatattcc gtcaaatcga caaagtatta ttaccgaaag attacttgcg tctgcgtatg acgggggagt
0491 ttgccagcga tatgtctgac gcagctggca ccatgtggct ggatgtcgca aagcgtgact ggagtgacgt
0561 catgctgcag gcttgcgact tatctcgtga ccagatgccc gcattatacg aaggcagcga aattactggt
0631 gctttgttac ctgaagttgc gaaagcgtgg ggtatggcga cggtgccagt tgtcgcaggc ggtggcgaca
0701 atgcagctgg tgcagttggt gtgggaatgg ttgatgctaa tcaggcaatg ttatcgctgg ggacgtcggg
0771 ggtctatttt gctgtcagcg aagggttctt aagcaagcca gaaagcgccg tacatagctt ttgccatgcg
0841 ctaccgcaac gttggcattt aatgtctgtg atgctgagtg cagcgtcgtg tctggattgg gccgcgaaat
0911 taaccggcct gagcaatgtc ccagctttaa tcgctgcagc tcaacaggct gatgaaagtg ccgagccagt
0981 ttggtttctg ccttatcttt ccggcgagcg tacgccacac aataatcccc aggcgaaggg ggttttcttt
1051 ggtttgactc atcaacatgg ccccaatgaa ctggcgcgag cagtgctgga aggcgtgggt tatgcgctgg
1121 cagatggcat ggatgtcgtg catgcctgcg gtattaaacc gcaaagtgtt acgttgattg ggggcggggc
1191 gcgtagtgag tactggcgtc agatgctggc ggatatcagc ggtcagcagc tcgattaccg tacggggggg
1261 gatgtggggc cagcactggg cgcagcaagg ctggcgcaga tcgcggcgaa tccagagaaa tcgctcattg
1331 aattgttgcc gcaactaccg ttagaacagt cgcatctacc agatgcgcag cgttatgccg cttatcagcc
1401 acgacgagaa acgttccgtc gcctctatca gcaacttctg ccattaatgg cgtaaACGTT ATCCCCTGCC
1471 TGACCGGGTG GGGGATAATT CACATCTATA TATCTCAGTA ATTAATTAAT ATTTAGTATG AATTTATTCT
1541 GAAAATCATT TGTTA
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