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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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|
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Related gene (MG1655 PEC)
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Gene Search
|
Search MG1655 PEC by gene name:
yiaJ
|
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Related strains
|
|
Strains Search
|
Search strains by gene name:
yiaJ
Search strains by all related name:
yiaJ b3574 ECK3563 JW3546
|
General information (Go to Linear View: )
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Gene Name
|
yiaJ
|
|
Alternative name
|
b3574,ECK3563,JW3546
|
|
Location, Length
|
3,897,883 - 3,898,731
(
+
)
;
83.89
min
;
849
(bp) ,
282
(aa)
|
|
Product
|
predicted DNA-binding transcriptional repressor
|
|
Note
|
ECK3563:JW3546:b3574
|
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Function
|
|
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PID
|
85676469
|
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YIAJ_ECOLI
(
P37671
;
Q2M7N7
)
|
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- Protein name
|
RecName: Full=HTH-type transcriptional regulator yiaJ; AltName: Full=YiaKLMNOPQRS operon repressor; Short=YiaK-S operon repressor;
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- Synonyms
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- Gene name
|
Name=yiaJ; OrderedLocusNames=b3574, JW3546;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
|
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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PSI-BLAST
|
|
|
nr
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BLAST
|
predicted DNA-binding transcriptional repressor [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MGKEVMGKKE NEMAQEKERP AGSQSLFRGL MLIEILSNYP NGCPLAHLSE LAGLNKSTVH RLLQGLQSCG
0071 YVTTAPAAGS YRLTTKFIAV GQKALSSLNI IHIAAPHLEA LNIATGETIN FSSREDDHAI LIYKLEPTTG
0141 MLRTRAYIGQ HMPLYCSAMG KIYMAFGHPD YVKSYWESHQ HEIQPLTRNT ITELPAMFDE LAHIRESGAA
0211 MDREENELGV SCIAVPVFDI HGRVPYAVSI SLSTSRLKQV GEKNLLKPLR ETAQAISNEL GFTVRDDLGA
0281 IT
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 ATTGATGAAT TTCAAAAGAC ATAAAAATCA
-070 ATTGGTTATA AATTATCTGT CGAGATCGTG AACTACGGCA CACTTTGCGC TACCATCAGG ACGCGACAAA
0001 atggggaaag aagtgatggg aaaaaaagag aacgagatgg cgcaggaaaa agagcgtcca gccggaagcc
0071 agagtctgtt tcgcgggttg atgctgattg agattttgag caactatcca aacggttgtc cgttggcgca
0141 tctttcggag ctggctggtt taaataagag taccgtccat cgcttattgc agggattaca gtcctgcggc
0211 tatgtgacca ccgcgcctgc cgcagggagt tatcgcctga ccaccaaatt tattgccgtc gggcagaagg
0281 cgctgtcttc gctgaatatc attcatatcg ccgctccgca tcttgaggca ctgaacatcg ccactggtga
0351 aaccattaac ttctccagcc gcgaagacga tcacgctatt ttgatttata agctggaacc cacaaccggg
0421 atgctgcgaa cccgtgccta tattggccag catatgccgc tctactgttc cgcaatgggc aagatctaca
0491 tggcgtttgg tcacccggac tacgtgaagt catactggga aagccatcag catgagatcc agccgttaac
0561 ccgcaatacc attaccgagc tgcccgcgat gttcgacgaa ctggcgcaca ttcgtgaaag cggagcggcg
0631 atggacagag aagaaaacga actcggcgtc tcctgtattg ctgttccggt gtttgatatt catgggcggg
0701 tgccgtacgc cgtgtcgatt tcgctttcga catcacgtct gaaacaggtg ggagagaaaa atctcctgaa
0771 accactgcgt gaaaccgcgc aggctatttc taatgaactg ggatttactg tcagggatga cctgggcgcg
0841 atcacataaC GCTTTGGACA AGTGCCAAAA CTTTAACATT TCCTTCGTTG GATCAAAGCA GTAGGGACGC
0911 GCTCTCTGGC ACTCTGCTGT TTTAGTGCAA AGGAGTGAT
|
