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PEC Original Annotations
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Essentiality
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|
Class
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non-essential
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|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
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|
Gene Search
|
Search MG1655 PEC by gene name:
yiaN
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yiaN
Search strains by all related name:
yiaN b3578 ECK3567 JW5651
|
General information (Go to Linear View: )
|
|
Gene Name
|
yiaN
|
|
Alternative name
|
b3578,ECK3567,JW5651
|
|
Location, Length
|
3,894,334 - 3,895,611
(
-
)
;
83.82
min
;
1278
(bp) ,
425
(aa)
|
|
Product
|
predicted transporter
|
|
Note
|
ECK3567:JW5651:b3578
|
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Function
|
|
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PID
|
85676465
|
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SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YIAN_ECOLI
(
P37675
;
Q2M7P1; Q6BF20
)
|
|
- Protein name
|
RecName: Full=2,3-diketo-L-gulonate TRAP transporter large permease protein yiaN;
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- Synonyms
|
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- Gene name
|
Name=yiaN; OrderedLocusNames=b3578, JW5651;
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Homology Analysis
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BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
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PSI-BLAST
|
|
|
SWISS-PROT
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BLAST
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PSI-BLAST
|
|
|
nr
|
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BLAST
|
predicted transporter [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MAVLIFLGCL LGGIAIGLPI AWALLLCGAA LMFWLDMFDV QIMAQTLVNG ADSFSLLAIP FFVLAGEIMN
0071 AGGLSKRIVD LPMKLVGHKP GGLGYVGVLA AMIMASLSGS AVADTAAVAA LLVPMMRSAN YPVNRAAGLI
0141 ASGGIIAPII PPSIPFIIFG VSSGLSISKL FMAGIAPGMM MGATLMLTWW WQASRLNLPR QQKATMQEIW
0211 HSFVSGIWAL FLPVIIIGGF RSGLFTPTEA GAVAAFYALF VATVIYREMT FATLWHVLIG AAKTTSVVMF
0281 LVASAQVSAW LITIAELPMM VSDLLQPLVD SPRLLFIVIM VAILIVGMVM DLTPTVLILT PVLMPLVKEA
0351 GIDPIYFGVM FIINCSIGLI TPPIGNVLNV ISGVAKLKFD DAVRGVFPYV LVLYSLLVVF VFIPDLIILP
0421 LKWIN
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 tgcccaccag cctcgttatc gcattctttg
-070 aactgcgtca tttatatcaa ctcatcacgc gtagcaattc tctaacgtcg ccaccgcaag gagcttaatc
0001 atggctgtgc tgatttttct gggctgtctg ttgggtggta ttgctatcgg tttgcctatt gcctgggcac
0071 tgttgttgtg cggggcggcg ttaatgttct ggctggacat gtttgatgtc cagatcatgg cacaaacgct
0141 ggtgaacgga gccgatagct tctccctgct ggcgattccg ttctttgtgc tggcgggtga aatcatgaat
0211 gcgggcggct tgtcaaaacg cattgttgac ctgccgatga aactggtggg gcataaacca ggcgggctgg
0281 gctacgtcgg cgtgctggca gctatgatta tggcgagcct ttctggttct gccgttgcgg ataccgccgc
0351 cgttgccgct ctactggtgc cgatgatgcg cagcgccaac tatccggtca accgggcggc ggggctgatt
0421 gcctctggcg gcattatcgc gccaattatt cccccttcca ttccgtttat tatcttcggc gtttccagcg
0491 gattatccat cagtaagctg tttatggcgg gcattgcccc tggcatgatg atgggcgcaa cgctgatgct
0561 tacctggtgg tggcaggcca gtcgccttaa tttaccccgc cagcaaaaag caacgatgca ggaaatctgg
0631 cactcttttg tctccggtat ctgggcgctg tttcttccag tcatcattat tggcgggttt cgctccggcc
0701 tgtttacccc taccgaagcc ggggccgttg ctgctttcta tgcgctgttt gtcgccacag ttatttaccg
0771 tgaaatgacc ttcgccacac tttggcatgt actcattggc gcggcgaaaa ccacctcagt ggttatgttt
0841 ctggtggcct cggcacaagt ttccgcctgg ctgattacca ttgctgaact gccgatgatg gtttctgatt
0911 tactgcaacc gttggtcgat tcaccgcgtc tgctgtttat cgtcattatg gtggctatcc tgattgtcgg
0981 catggtcatg gatttaacgc cgacggtatt aattcttacc ccggtattaa tgcctttagt taaagaggca
1051 ggaatcgatc cgatttattt cggtgtcatg tttatcatta actgctcaat cggcttaatt acaccgccta
1121 tcggtaatgt acttaacgtt atttcagggg tggcaaaact caaattcgat gatgcagtca gaggcgtttt
1191 cccttacgtc ctggttttat attcattatt agtcgtattt gtttttattc ccgatctcat catcctccct
1261 ttgaaatgga ttaattaaaa ggaaaatatt atgaaattac gctctgtaac ctacgcatta ttcattgctg
1331 gcctggctgc attcagcaca tcttctctgg cggcacaatc tttacgtt
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