MG1655
W3110
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Gene Report : sgbU
PEC Original Annotations
Essentiality
     Class non-essential
     References (PMID)  
Related gene (MG1655 PEC)
     Gene Search Search MG1655 PEC by gene name:  sgbU
Related strains
     Strains Search Search strains by gene name:  sgbU   Search strains by all related name:  sgbU b3582 ECK3571 JW5650 o297 yiaR

General information  (Go to Linear View:)
 Gene Name sgbU  
 Alternative name b3582,ECK3571,JW5650,o297,yiaR  
 Location, Length 3,890,323 - 3,891,183 (  -  ) ;   83.73 min ; 861 (bp) ,   286 (aa) Go to Linear View
 Product predicted L-xylulose 5-phosphate 3-epimerase  
 Note ECK3571:JW5650:b3582  
 Function  
 PID 85676461  
SWISS-PROT  ( Show details )
  botton Entry name(Acc.no) SGBU_ECOLI ( P37679 ; Q2M7P5 )
    -  Protein name RecName: Full=Putative L-ribulose-5-phosphate 3-epimerase sgbU; EC=5.1.3.22; AltName: Full=L-xylulose-5-phosphate 3-epimerase;  
    -  Synonyms  
    -  Gene name Name=sgbU; Synonyms=yiaR; OrderedLocusNames=b3582, JW5650;  

 Linear View
View Location
   3880.0  –  3905.0 (KBP)

Homology Analysis
BLAST
    Bacteria
         GTOP  
    PDB
         PSI-BLAST  
    SWISS-PROT
        BLAST  
         PSI-BLAST RecName: Full=Putative L-ribulose-5-phosphate 3-epimerase ulaE; AltName: Full=L-xylulose-5-phosphate 3-epimerase; AltName: Full=L-ascorbate utilization protein E
    nr
         BLAST unnamed protein product [Escherichia coli str. K-12 substr. MG1655]  
Pfam 27.0   (database updated : 2013-03 )
    Pfam

Other Cross-Reference
    EcoCyc sgbU 

Sequences
Amino acid
FASTA format 
0001 MRNHQLGIYE KALAKDLSWP ERLVLAKSCG FDFVEMSVDE TDERLSRLDW SAAQRTSLVA AMIETGVGIP 
0071 SMCLSAHRRF PFGSRDEAVR ERAREIMSKA IRLARDLGIR TIQLAGYDVY YEDHDEGTRQ RFAEGLAWAV 
0141 EQAAASQVML AVEIMDTAFM NSISKWKKWD EMLASPWFTV YPDVGNLSAW GNDVPAELKL GIDRIAAIHL 
0211 KDTQPVTGQS PGQFRDVPFG EGCVDFVGIF KTLHKLNYRG SFLIEMWTEK AKEPVLEIIQ ARRWIEARMQ 
0281 EAGFIC
Nucleotide
FASTA format

View sequence out neighbor 100bp 
-100                                             aaagcgttta ttgccgggcg ggcactggca 
-070 ggcgcggcaa atccggcgca agtggctggc gatttccatg cgcaaatcga cgctatctgg ggaggtgcgc 
0001 gtgcgtaatc atcagttagg gatttatgaa aaagcgctgg cgaaagatct ctcctggccg gagcggctgg 
0071 tgctggcaaa aagctgcggt tttgattttg tcgaaatgtc ggtggatgaa accgacgaac ggctctcacg 
0141 tcttgactgg agcgccgcac aaaggacttc gctggttgcc gcgatgatcg aaacaggtgt tgggatcccg 
0211 tcgatgtgcc tgtccgcaca tcgtcgcttt ccctttggta gccgtgacga ggcagtgcgc gaacgggcgc 
0281 gggaaatcat gagtaaagcg attcgcctgg cgcgcgatct cggcattcgc accatccagc tggcaggtta 
0351 tgacgtctat tacgaagacc acgacgaagg cacccggcaa cgttttgctg aagggctggc gtgggcagtc 
0421 gaacaggcgg cggcatcaca agtaatgctg gcggtggaga ttatggatac cgcgtttatg aactccatca 
0491 gcaaatggaa aaaatgggac gagatgctcg cctcaccgtg gttcaccgtc tacccggacg tcggcaacct 
0561 cagcgcctgg ggcaatgatg ttcccgccga actgaaactg ggcattgacc gtatcgccgc gatccacctg 
0631 aaagacaccc agccagtcac cgggcaaagt cccggacagt tccgcgacgt gccgtttggc gaaggctgcg 
0701 tcgatttcgt tggcatcttc aaaacgctgc ataaactgaa ctatcgcggt tctttcctga ttgagatgtg 
0771 gaccgaaaaa gccaaagagc cggtgctgga gattattcag gcgcggcgtt ggattgaagc gcgtatgcag 
0841 gaggctggat ttatatgtta gagcaactga aagccgacgt gctggcggcg aatctggcgc ttcccgctca 
0911 ccatctggtg acgttcacct ggggcaatgt cagcgcggta gacgaaacgc g