|
PEC Original Annotations
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|
Essentiality
|
|
Class
|
non-essential
|
|
References (PMID)
|
|
|
Related gene (MG1655 PEC)
|
|
Gene Search
|
Search MG1655 PEC by gene name:
yiaT
|
|
Related strains
|
|
Strains Search
|
Search strains by gene name:
yiaT
Search strains by all related name:
yiaT b3584 ECK3573 JW3556
|
General information (Go to Linear View: )
|
|
Gene Name
|
yiaT
|
|
Alternative name
|
b3584,ECK3573,JW3556
|
|
Location, Length
|
3,888,547 - 3,889,287
(
+
)
;
83.69
min
;
741
(bp) ,
246
(aa)
|
|
Product
|
hypothetical protein
|
|
Note
|
ECK3573:JW3556:b3584
|
|
Function
|
|
|
PID
|
85676459
|
|
SWISS-PROT
(
Show details
)
|
Entry name(Acc.no)
|
YIAT_ECOLI
(
P37681
;
Q2M7P7
)
|
|
- Protein name
|
RecName: Full=Putative outer membrane protein yiaT; Flags: Precursor;
|
|
- Synonyms
|
|
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- Gene name
|
Name=yiaT; OrderedLocusNames=b3584, JW3556;
|
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Homology Analysis
|
|
BLAST
|
|
Bacteria
|
|
GTOP
|
|
|
PDB
|
|
PSI-BLAST
|
|
|
SWISS-PROT
|
|
BLAST
|
RecName: Full=Putative outer membrane protein yiaT; Flags: Precursor
|
|
PSI-BLAST
|
|
|
nr
|
|
BLAST
|
predicted protein [Escherichia coli str. K-12 substr. MG1655]
|
|
Pfam 27.0
(database updated :
2013-03
)
|
|
Pfam
|
|
| Sequences |
Amino acid
FASTA format
|
0001 MLINRNIVAL FALPFMASAT ASELSIGAGA AYNESPYRGY NENTKAIPLI SYEGDTFYVR QTTLGFILSQ
0071 SEKNELSLTA SWMPLEFDPT DNDDYAMQQL DKRDSTAMAG VAWYHHERWG TVKASAAADV LDNSNGWVGE
0141 LSVFHKMQIG RLSLTPALGV LYYDENFSDY YYGISESESR RSGLASYSAQ DAWVPYVSLT AKYPIGEHVV
0211 LMASAGYSEL PEEITDSPMI DRNESFTFVT GVSWRF
|
Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 TTTTATATAT TACTATATAA ATATGAATCT
-070 TGCACCGGAG AAATTGTAAG CATTATTATG CCGACTCTTT TTTATCTTAT TTTAAAATGG AATACCGGAC
0001 atgttaatta atcgcaatat tgtggcgtta tttgcgttgc cttttatggc aagcgcaact gcttctgaat
0071 tatccattgg tgctggtgcg gcttataatg aatcgcctta tcgcggttat aatgaaaata cgaaggcaat
0141 tccgctgatt agttatgaag gtgatacttt ttatgttcgt cagaccacgt taggttttat tctgtcgcaa
0211 agtgaaaaaa atgaacttag cctgaccgca tcctggatgc cgctggaatt tgaccctacc gataatgacg
0281 attatgccat gcaacagctt gataagcgtg atagtacggc tatggcgggg gttgcctggt atcaccacga
0351 gcgttgggga accgtgaaag cctctgcagc tgcggacgtt ctggataaca gcaacggctg ggtgggggag
0421 ctatcggtat tccacaaaat gcagataggt cgtctgtcgc tgacacctgc gctgggcgtt ctctattatg
0491 acgagaattt cagtgactat tactatggca tttcagagag tgagtcccgt cgtagcggtc tggcaagtta
0561 ttccgcgcag gatgcctggg tgccctatgt cagcctgacg gcaaaatacc cgataggaga gcacgtcgta
0631 ttgatggcga gcgcaggata cagcgagctg ccggaagaga ttaccgacag cccgatgatt gatcgtaatg
0701 agagttttac ctttgtcacc ggggtgagct ggcgttttta aTTCACCGGT GGATGTCGGT GCGGCTGGTG
0771 CTCCGTCGTA ATGCCACAAA GGTTGTTGCT CTGGATTGCT CTGTTCATAC CGGGAACCTG GCGTCTGAAT
0841 C
|
