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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
selA
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Related strains
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Strains Search
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Search strains by gene name:
selA
Search strains by all related name:
selA b3591 ECK3580 fdhA JW3564
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General information (Go to Linear View: )
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Gene Name
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selA
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Alternative name
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b3591,ECK3580,fdhA,JW3564
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Location, Length
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3,879,166 - 3,880,557
(
+
)
;
83.49
min
;
1392
(bp) ,
463
(aa)
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Product
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selenocysteine synthase
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Note
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ECK3580:JW3564:b3591
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Function
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PID
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85676452
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
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SELA_ECOLI
(
P0A821
;
P23328; P58225; P78119; Q2M7Q4
)
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- Protein name
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RecName: Full=L-seryl-tRNA(Sec) selenium transferase; EC=2.9.1.1; AltName: Full=Selenocysteine synthase; Short=Sec synthase; AltName: Full=Selenocysteinyl-tRNA(Sec) synthase;
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- Synonyms
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- Gene name
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Name=selA; Synonyms=fdhA; OrderedLocusNames=b3591, JW3564;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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RecName: Full=L-seryl-tRNA
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PSI-BLAST
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RecName: Full=L-seryl-tRNA
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nr
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BLAST
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selenocysteine synthase [Escherichia coli O157:H7 EDL933]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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MMBR References
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J Bacteriol. 1991;173(16):4983-93.
Expression and operon structure of the sel genes of Escherichia coli and identification of a third selenium-containing formate dehydrogenase isoenzyme.
Sawers G, Heider J, Zehelein E, Bock A.
(
1650339
)
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| Sequences |
Amino acid
FASTA format
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0001 MTTETRSLYS QLPAIDRLLR DSSFLSLRDT YGHTRVVELL RQMLDEAREV IRGSQTLPAW CENWAQEVDA
0071 RLTKEAQSAL RPVINLTGTV LHTNLGRALQ AEAAVEAVAQ AMRSPVTLEY DLDDAGRGHR DRALAQLLCR
0141 ITGAEDACIV NNNAAAVLLM LAATASGKEV VVSRGELVEI GGAFRIPDVM RQAGCTLHEV GTTNRTHAND
0211 YRQAVNENTA LLMKVHTSNY SIQGFTKAID EAELVALGKE LDVPVVTDLG SGSLVDLSQY GLPKEPMPQE
0281 LIAAGVSLVS FSGDKLLGGP QAGIIVGKKE MIARLQSHPL KRALRADKMT LAALEATLRL YLHPEALSEK
0351 LPTLRLLTRS AEVIQIQAQR LQAPLAAHYG AEFAVQVMPC LSQIGSGSLP VDRLPSAALT FTPHDGRGSH
0421 LESLAARWRE LPVPVIGRIY DGRLWLDLRC LEDEQRFLEM LLK
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Nucleotide
FASTA format
View sequence out neighbor 100bp
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-100 TGATGCGCGA TATGTCCTCC TGACCCATCT
-070 CACGTTACAA TCCGTGGTTA TGTTAAACGC CCTTCTCCGT GTGAGAGGGC CTTGATCAGC CAGGTTTCCT
0001 atgacaaccg aaacgcgttc cctctatagt caacttccgg ctattgatcg cttattgcgc gatagctcct
0071 tcctttcttt gcgtgatact tatggtcaca cccgcgtggt ggaattgttg cgtcagatgc tcgacgaagc
0141 gcgagaagtg attcgtggca gccagacgct gcctgcgtgg tgtgaaaact gggcgcaaga agtcgatgcc
0211 cggttgacga aagaagcgca gagcgcgctg cgtccggtga tcaacctgac gggaaccgtg ctgcatacca
0281 accttgggcg agctttacag gcggaagccg cggtggaagc cgttgcgcag gctatgcgtt cgccagtgac
0351 cctcgagtat gatctggacg acgccggacg cggacatcgc gatcgggcgc tggcgcagct gctgtgccgt
0421 attacggggg cggaagatgc ctgtatcgtc aataacaatg cggcggcggt gttattgatg ttggcggcca
0491 ctgccagcgg aaaagaggtg gtggtatctc gcggcgaact ggtggagatt ggcggcgcgt ttcgtattcc
0561 cgatgttatg cgtcaggcag gctgcaccct acacgaagta gggaccacca accgcacgca cgcgaatgat
0631 tatcgtcagg cggtgaatga aaataccgca ctgttgatga aagtacatac cagtaactac agcattcagg
0701 ggttcaccaa agcgatagat gaagcggaac tggtggcgct cggcaaagag ctggatgttc ccgtagtgac
0771 tgatttaggc agtggctcgc tggtcgatct tagccagtac ggtttgccga aagagccaat gccgcaggag
0841 ttgattgcgg cgggcgtcag tctggtgagt ttctccggcg acaagttgtt aggcgggccg caggcaggaa
0911 ttattgttgg taaaaaagag atgatcgccc gcctgcaaag ccacccgctg aagcgtgcat tacgcgcgga
0981 taaaatgacc ctcgcggcgc tggaagccac gttgcgtctt tatttacacc ctgaagctct gagtgaaaaa
1051 ttaccgaccc tgcgcctgct tacccgcagc gcagaggtca ttcaaatcca ggcacaacgt ttacaggccc
1121 cccttgccgc acattacggc gcggagtttg cggtacaggt tatgccatgt ctttcgcaga ttggcagtgg
1191 ttcgctgccg gttgatcgcc tgccgagcgc ggcattaacg tttacacccc atgatggacg cggtagccac
1261 cttgagtcat tagccgcccg ctggcgtgaa ttgccagtgc cggtgattgg tcgtatttat gacggacgat
1331 tgtggctgga tttacgctgc cttgaagatg agcaacggtt tttggagatg ttgttgaaat gaTTATTGCG
1401 ACTGCCGGAC ACGTTGACCA CGGCAAAACA ACCTTATTGC AGGCGATTAC TGGCGTAAAT GCTGACCGTC
1471 TGCCGGAAGA AAAAAAGCGC GG
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