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PEC Original Annotations
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Essentiality
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Class
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non-essential
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References (PMID)
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Related gene (MG1655 PEC)
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Gene Search
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Search MG1655 PEC by gene name:
rhsA
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Related strains
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Strains Search
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Search strains by gene name:
rhsA
Search strains by all related name:
rhsA b3593 ECK3582 JW3566
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General information (Go to Linear View: )
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Gene Name
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rhsA
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Alternative name
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b3593,ECK3582,JW3566
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Location, Length
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3,874,099 - 3,878,232
(
-
)
;
83.38
min
;
4134
(bp) ,
1377
(aa)
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Product
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rhsA element core protein RshA
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Note
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ECK3582:JW3566:b3593
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Function
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PID
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85676450
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SWISS-PROT
(
Show details
)
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Entry name(Acc.no)
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RHSA_ECOLI
(
P16916
;
Q2M7Q6
)
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- Protein name
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RecName: Full=Protein rhsA;
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- Synonyms
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- Gene name
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Name=rhsA; OrderedLocusNames=b3593, JW3566;
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Homology Analysis
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BLAST
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Bacteria
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GTOP
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PDB
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PSI-BLAST
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SWISS-PROT
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BLAST
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RecName: Full=Protein rhsA
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PSI-BLAST
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RecName: Full=Protein rhsA
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nr
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BLAST
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rhsA element core protein RshA [Escherichia coli str. K-12 substr. MG1655]
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Pfam 27.0
(database updated :
2013-03
)
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Pfam
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MMBR References
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J Bacteriol. 1993;175:2799-2808
Rhs elements of Escherichia coli K-12: complex composites of shared and unique components that have different evolutionary histories.
Zhao, S., C. H. Sandt, G. Feulner, D. A. Vlazny, J. A. Gray, and C. W. Hill.
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| Sequences |
Amino acid
FASTA format
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0001 MSGKPAARQG DMTQYGGSIV QGSAGVRIGA PTGVACSVCP GGVTSGHPVN PLLGAKVLPG ETDIALPGPL
0071 PFILSRTYSS YRTKTPAPVG SLGPGWKMPA DIRLQLRDNT LILSDNGGRS LYFEHLFPGE DGYSRSESLW
0141 LVRGGVAKLD EGHRLAALWQ ALPEELRLSP HRYLATNSPQ GPWWLLGWCE RVPEADEVLP APLPPYRVLT
0211 GLVDRFGRTQ TFHREAAGEF SGEITGVTDG AWRHFRLVLT TQAQRAEEAR QQAISGGTEP SAFPDTLPGY
0281 TEYGRDNGIR LSAVWLTHDP EYPENLPAAP LVRYGWTPRG ELAVVYDRSG KQVRSFTYDD KYRGRMVAHR
0351 HTGRPEIRYR YDSDGRVTEQ LNPAGLSYTY QYEKDRITIT DSLDRREVLH TQGEAGLKRV VKKEHADGSV
0421 TQSQFDAVGR LRAQTDAAGR TTEYSPDVVT GLITRITTPD GRASAFYYNH HNQLTSATGP DGLELRREYD
0491 ELGRLIQETA PDGDITRYRY DNPHSDLPCA TEDATGSRKT MTWSRYGQLL SFTDCSGYVT RYDHDRFGQM
0561 TAVHREEGLS QYRAYDSRGQ LIAVKDTQGH ETRYEYNIAG DLTAVIAPDG SRNGTQYDAW GKAVRTTQGG
0631 LTRSMEYDAA GRVIRLTSEN GSHTTFRYDV LDRLIQETGF DGRTQRYHHD LTGKLIRSED EGLVTHWHYD
0701 EADRLTHRTV KGETAERWQY DERGWLTDIS HISEGHRVAV HYRYDEKGRL TGERQTVHHP QTEALLWQHE
0771 TRHAYNAQGL ANRCIPDSLP AVEWLTYGSG YLAGMKLGDT PLVEYTRDRL HRETLRSFGR YELTTAYTPA
0841 GQLQSQHLNS LLSDRDYTWN DNGELIRISS PRQTRSYSYS TTGRLTGVHT TAANLDIRIP YATDPAGNRL
0911 PDPELHPDST LSMWPDNRIA RDAHYLYRYD RHGRLTEKTD LIPEGVIRTD DERTHRYHYD SQHRLVHYTR
0981 TQYEEPLVES RYLYDPLGRR VAKRVWRRER DLTGWMSLSR KPQVTWYGWD GDRLTTIQND RTRIQTIYQP
1051 GSFTPLIRVE TATGELAKTQ RRSLADALQQ SGGEDGGSVV FPPVLVQMLD RLESEILADR VSEESRRWLA
1121 SCGLTVEQMQ NQMDPVYTPA RKIHLYHCDH RGLPLALISK EGTTEWCAEY DEWGNLLNEE NPHQLQQLIR
1191 LPGQQYDEES GLYYNRHRYY DPLQGRYITQ DPIGLKGGWN FYQYPLNPVT NTDPLGLEVF PRPFPLPIPW
1261 PKSPAQQQAD DNAAKALTKW WNDTASQRIF DSLILNNPGL ALDITMIASR GNVADTGITD RVNDIINDRF
1331 WSDGKKPDRC DVLQELIDCG DISAKDAKST QKAWNCRHSR QSNDKKR
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Nucleotide
FASTA format
View sequence out neighbor 100bp
|
-100 attatttcac tctgatggat atctcacttc
-070 aggctttctt ataaatctgt agggtttcgc ctgtcagcag acaaataacc cgataaaaca aggatgagaa
0001 atgagcggaa aaccggcagc gcgtcagggc gacatgacgc agtatggcgg tagcattgtt cagggttcag
0071 ccggggtgcg cattggtgcc cccaccggcg tggcctgttc ggtgtgcccc ggcggagtga cgtccggcca
0141 tccggtcaat cccctgctcg gtgcaaaggt ccttcccggt gaaaccgaca tcgccctgcc cggcccgctg
0211 ccgttcatcc tctcccgcac ctacagcagt taccggacaa aaacgcccgc gccggtgggg agcctcggcc
0281 ccggctggaa aatgcctgcg gatatccgct tacagctgcg cgataacaca ctgatactca gtgataacgg
0351 cggcagaagc ctgtattttg agcacctgtt tcccggtgag gacggttaca gccgcagcga gtcactgtgg
0421 ctggtgcgcg gcggcgtggc gaaactggat gaaggtcacc ggctggccgc actctggcag gcgctgccgg
0491 aagaactccg cttaagtccg catcgttatc tggcgacaaa cagtccgcag gggccgtggt ggctgctcgg
0561 ttggtgtgag cgggtgccgg aagcggatga ggtgctgcct gcgccgctgc cgccgtaccg ggtactgacc
0631 gggctggtgg accgcttcgg gcgcacacag acgttccacc gcgaagccgc cggtgaattc agcggcgaaa
0701 tcaccggcgt gacggatggt gcctggcgtc acttccggct ggtactgacc acgcaggcgc agcgggcaga
0771 agaagcccgg cagcaggcca tttccggcgg gacggaaccg tccgcttttc ctgataccct gccgggttac
0841 accgaatatg gccgggacaa cggcatccgt ctgtctgccg tgtggctgac gcacgacccg gaatacccgg
0911 agaatttacc tgccgcgccg ctggtgcgct atggctggac gccacgcggc gaactggcgg tggtgtatga
0981 ccgtagtggc aaacaggtgc gcagctttac ttacgatgat aaataccggg gccggatggt ggcgcaccgt
1051 cacacgggcc ggccggaaat ccgttaccgt tacgacagcg acgggcgggt gacagaacag ctaaacccgg
1121 caggcttaag ctacacgtat cagtatgaga aagaccgcat caccatcacc gacagcctgg accgccgtga
1191 agtgctgcac acgcagggcg aagccgggct gaagcgggtg gtgaaaaagg aacacgcgga cggcagcgtc
1261 acgcagagtc agtttgacgc cgtgggcagg ctcagggcac agacggatgc cgcaggcagg acaacagagt
1331 acagcccgga tgtggtgacg ggcctcatca cgcgcataac cacgccggat ggcagggcat cggcgtttta
1401 ctataaccac cacaaccagt taacgtcagc caccgggcct gacgggctgg aattgcgccg ggaatatgat
1471 gaattgggcc gtctgattca ggaaactgcc cctgacggcg atatcacccg ctaccgttat gataatccac
1541 acagtgactt accctgcgca acggaagatg ccaccggcag ccggaaaacc atgacgtgga gccgttacgg
1611 tcagttgctg agcttcaccg actgttccgg ttatgtaacc cgttatgacc atgaccgctt cgggcagatg
1681 acggcggtgc accgcgagga agggctgagt cagtaccgcg catacgacag ccgtggacag ttaattgccg
1751 tgaaagacac gcagggccat gaaacgcggt atgaatacaa catcgccggt gacctgaccg ccgtcattgc
1821 cccggacggc agcagaaacg ggacacagta cgatgcgtgg ggaaaggccg tccgtaccac gcagggcggg
1891 ctaacgcgca gtatggaata cgatgctgcc ggacgggtca tccgcctgac cagtgaaaac ggcagccaca
1961 ccaccttccg ttacgatgta cttgaccggc tgatacagga aaccggcttt gacggccgca cacagcgtta
2031 tcaccacgac ctgaccggca aacttatccg cagcgaggat gagggtctgg tcacccactg gcactatgac
2101 gaagcagacc gcctcacgca ccgcaccgtg aagggtgaaa ccgcagagcg gtggcagtat gacgaacgtg
2171 gctggctgac agacatcagc catatcagcg aagggcaccg ggtggcggtg cattacaggt atgatgagaa
2241 aggccggctg accggtgagc gtcagacggt gcatcacccg cagacggaag cactgctctg gcagcatgag
2311 accagacatg cgtacaacgc gcaggggctg gcgaaccgct gtataccgga cagcctgccc gccgtggaat
2381 ggctgaccta cggcagcggt tacctggcag gcatgaaact cggcgacaca ccgctggtgg agtacacccg
2451 cgaccgcctg caccgggaaa cgctgcgcag cttcggccgt tatgaactca ccaccgctta tacccctgcc
2521 gggcagttac agagccagca cctgaacagc ctgctgtctg accgcgatta cacctggaac gacaacggcg
2591 aactcatccg catcagcagc ccgcgccaga cccggagtta cagctacagc accaccggca ggctgaccgg
2661 cgttcacacc accgcagcga atctggatat ccgcatcccg tatgccacag acccggcagg taaccgcctg
2731 cccgacccgg agctgcaccc ggacagcacc ctcagcatgt ggccggataa ccgtatcgcc cgtgacgcgc
2801 actatcttta ccggtatgac cgtcacggca ggctgacaga gaaaaccgac ctcatcccgg aaggggttat
2871 ccgcacggat gatgagcgga ctcaccggta ccattacgac agtcagcacc ggctggtgca ctacacgcgg
2941 acacaatatg aagagccgct ggtcgaaagt cgctatcttt acgacccgct gggccgcagg gtggcaaaac
3011 gggtgtggcg gcgtgaacgg gacctgacgg gctggatgtc gctgtcacgg aaaccgcaag tgacctggta
3081 cggctgggac ggcgaccggc tgaccacaat acagaacgac agaacccgca tccagacgat ttatcagccg
3151 gggagcttca cgccactcat cagagttgaa accgccaccg gtgagctggc gaaaacgcag cgccgcagcc
3221 tggcggatgc gcttcagcag tccggcggcg aagacggtgg cagtgtggtg ttcccgccgg tgctggtgca
3291 gatgctcgac cggctggaaa gtgaaatcct ggctgaccgg gtgagtgagg aaagccgccg ctggctggca
3361 tcgtgcggcc tgaccgtgga gcagatgcaa aaccagatgg acccggtgta cacgccggcg cgaaaaatcc
3431 acctgtacca ctgcgaccat cgcggcctgc cgctggccct tatcagcaag gaagggacaa cagaatggtg
3501 cgcagaatac gatgaatggg gcaacctgct gaatgaagag aacccgcatc agctgcagca gcttatccgc
3571 ctgccggggc agcagtatga tgaggagtcc ggcctgtatt acaaccgcca ccgctattat gacccgctgc
3641 aggggcggta tatcactcag gatccgattg ggctgaaggg gggatggaat ttttatcagt atccgttgaa
3711 tccagttacg aatacagatc ctctggggtt agaagttttt cctagaccat tccccttgcc aattccatgg
3781 cccaaaagcc ctgcacagca gcaagcagat gataatgctg caaaagcatt gacaaaatgg tggaacgata
3851 cagcatcaca aagaatattt gactctctaa tattgaataa tccgggacta gcattagata taacaatgat
3921 agcttctcgt ggaaatgttg cagacacagg gataactgat cgtgtcaatg acataataaa tgacagattc
3991 tggagtgatg ggaaaaaacc cgacagatgt gacgtacttc aggaactaat tgattgtggt gatattagtg
4061 ctaaagatgc aaaaagcaca cagaaagcct ggaattgtcg tcactccaga cagtcaaacg ataaaaaaag
4131 atagcccttg tggaggttcc tgcaatgtca aatacatacc agaaaagaaa ggcaagtaaa gagtatggtt
4201 tatataatca atgtaagaaa ctaaatgatg atga
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